User: sarvism

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sarvism0
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Posts by sarvism

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Comment: C: NCBI vs Liftover vs ENSEMBL for Assembly Conversion for SNP data (GRCh37 to GRCh
... Sorry for the late response. NCBI is working for me and gave very few SNPs that were not in the new build, which is good. If I have other questions I will let you know, thank you for your help! ...
written 5 days ago by sarvism0
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Comment: C: NCBI vs Liftover vs ENSEMBL for Assembly Conversion for SNP data (GRCh37 to GRCh
... Thank you for your answer. I have primary assembly data only, so in NCBI I would be remapping only the primary assembly alignments. ...
written 9 days ago by sarvism0
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NCBI vs Liftover vs ENSEMBL for Assembly Conversion for SNP data (GRCh37 to GRCh38)
... Hi, I'm a beginner to bioinformatics so hopefully someone can help with my question! I am trying to go from GRCh37 to GRCh38 for a large number of SNPs. I have an input bed file of around 700,000 SNPs that I have used for NCBI remap, ENSEMBL Assembly Converter, and Liftover (UCSC). These websites a ...
ncbi assembly snp liftover ensembl written 12 days ago by sarvism0

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