User: bioinformatics2020

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Posts by bioinformatics2020

<prev • 47 results • page 1 of 5 • next >
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Comment: C: R - How to convert a sequence in a fasta file into a matrix
... Look into the matrix function: https://www.rdocumentation.org/packages/base/versions/3.6.2/topics/matrix ...
written 21 hours ago by bioinformatics2020370
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Comment: C: R - How to convert a sequence in a fasta file into a matrix
... Today I learned that R has a `substring` function. ...
written 1 day ago by bioinformatics2020370
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Discrepancy Between Downloading All Ensembl -> Gene Mappings from Biomart Vs Only Mapping Certain IDS
... Hi all, I have Ensembl IDs that I am mapping to gene names. The way I've been doing it is going to biomart, selecting Ensembl Genes 101, and then human genes (GRCh38.p13.) I go attributes and select **GENE STABLE ID and GENE NAME** and download the resulting file (with ~67000 ensembl -> gene map ...
rna-seq written 26 days ago by bioinformatics2020370
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Comment: C: Split delimited text into a new row
... It's always a GREAT sight when I see somebody post a Tidyverse solution. :D ...
written 5 weeks ago by bioinformatics2020370
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Answer: A: New to NGS
... Support the website you're posting on AND learn about NGS/bioinformatics: https://www.biostarhandbook.com/ ...
written 10 weeks ago by bioinformatics2020370
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Comment: C: How to extract identical characters in multiple text files?
... Could you give an example of how these BLASTp result files look like? ...
written 11 weeks ago by bioinformatics2020370
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Comment: C: How to sum the genewise counts in edgeR ?
... Rpolicastro - I love seeing your tidyverse-esque responses on here. I always end up learning something new from ya. Quick question though. Whenever you create a sample data.frame, you always use this framework: structure(list(...... row.names = c(NA, -24L), class = "data.frame") Any reas ...
written 11 weeks ago by bioinformatics2020370
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Comment: C: Loop in R script
... I made some minor adjustments! Please try now. :) ...
written 12 weeks ago by bioinformatics2020370
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Comment: C: Loop in R script
... Can you send me what one of these files look like inside? ...
written 12 weeks ago by bioinformatics2020370
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Comment: C: file handling in R
... Appreciate the tips! Edited my original post. ...
written 12 weeks ago by bioinformatics2020370

Latest awards to bioinformatics2020

Scholar 12 weeks ago, created an answer that has been accepted. For A: software of single-cell RNA-seq from fastq or fasta
Teacher 12 weeks ago, created an answer with at least 3 up-votes. For A: software of single-cell RNA-seq from fastq or fasta
Scholar 12 weeks ago, created an answer that has been accepted. For A: software of single-cell RNA-seq from fastq or fasta
Popular Question 3 months ago, created a question with more than 1,000 views. For Finding All Genes (Differential or Not) in Seurat's FindAllMarkers
Commentator 5 months ago, created a comment with at least 3 up-votes. For C: scVelo on Seurat umap
Popular Question 7 months ago, created a question with more than 1,000 views. For In Seurat, How Do nCount_RNA Differ from nFeature_RNA?
Scholar 9 months ago, created an answer that has been accepted. For A: software of single-cell RNA-seq from fastq or fasta
Teacher 9 months ago, created an answer with at least 3 up-votes. For A: software of single-cell RNA-seq from fastq or fasta

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