User: Buttonwood

gravatar for Buttonwood
Buttonwood40
Reputation:
40
Status:
New User
Location:
China
Website:
http://buttonwood.gith...
Last seen:
5 years, 2 months ago
Joined:
6 years, 10 months ago
Email:
t*********@gmail.com

about me

Posts by Buttonwood

<prev • 17 results • page 1 of 2 • next >
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Answer: A: RepeatMasker errors and missing output files
... I used to run RepeatMasker by this: RepeatMasker -nolow -no_is -norna -parallel 1 -lib /data/tanhao/lib/RepeatMasker/Libraries/RepeatMasker.lib genome.fa >repeatmask.log 2>repeatmask.log.2 &; Hope it will help you. ...
written 5.2 years ago by Buttonwood40
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Answer: A: Free Ensembl Courses
... We'll happy to see if there are more useful docs about the API usage. ...
written 5.3 years ago by Buttonwood40
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Answer: A: GMOD Online Training 2014 coming up
... Sounds Great! ...
written 5.3 years ago by Buttonwood40
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Comment: C: What Can We Do For The Reads That Are Not Mapped To The Genome?
... 1.Do some assembly。 2.Map to nt/nt database for classfication. ...
written 5.4 years ago by Buttonwood40
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Answer: A: Edgeredef Failed When Running Repeatmodeler
... I got the same error Comparing batch-(111 of 113) to database: 100% completed, 0:0:0 (hh:mm:ss) est. time remaining. Comparing batch-(112 of 113) to database: 100% completed, 0:0:0 (hh:mm:ss) est. time remaining. Comparison Time: 0:12:36 Elapsed Time, 330 HSPs Collected RECON: Runnin ...
written 5.5 years ago by Buttonwood40
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Comment: C: Getting Cegma/Genewise To Work On Centos, Rhel
... Yes, I also done "sudo yum install glib-devel" but there is no such package; so I did "find ./ -name make |xargs sed -i 's/glib-config/pkg-config --libs glib-2.0/' " and it seems work. Thank you.   ##Darked89: ake changed to make ...
written 5.5 years ago by Buttonwood40 • updated 4.8 years ago by Darked894.2k
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Comment: C: Getting Cegma/Genewise To Work On Centos, Rhel
... Thanks you very much。 But I still need your help。 *I followed your steps * but get these: make CC="gcc" CFLAGS="-c -O3 glib-config --cflags" libwisebase.a ) /bin/sh: glib-config: command not found if test -x /bin/ranlib; then /bin/ranlib libdyna.a; else exit 0; fi if test -x /usr/bi ...
written 5.5 years ago by Buttonwood40
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Answer: A: Getting Cegma/Genewise To Work On Centos, Rhel
... Does anyone know how to install genewise on a redhat OS server? ...
written 5.5 years ago by Buttonwood40
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Answer: A: Compare A Denovo Assembly To The Reference Genome
... I think you can refer to Lastz. http://www.bx.psu.edu/miller_lab/dist/README.lastz-1.02.00/README.lastz-1.02.00a.html ...
written 5.7 years ago by Buttonwood40
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Answer: A: Aligning Pacbio Reads
... I think you can have a try of bwa mem. ...
written 5.8 years ago by Buttonwood40

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Supporter 5.4 years ago, voted at least 25 times.

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