User: sa91

gravatar for sa91
sa910
Reputation:
0
Status:
New User
Last seen:
1 day, 20 hours ago
Joined:
4 months ago
Email:
s**********@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by sa91

<prev • 4 results • page 1 of 1 • next >
0
votes
2
answers
95
views
2
answers
Comment: C: can I map multiple (>2) fastq reads against and assembly using bwa?
... Thanks for correcting me. I was getting confused and using the wrong terminology. It is from flow cells. I've been asked to map illumina short reads against my pacbio genome assembly to examine the coverage. ...
written 2 days ago by sa910
0
votes
2
answers
95
views
2
answers
Comment: C: can I map multiple (>2) fastq reads against and assembly using bwa?
... Thank you! I didn't realise that command was specifically for paired end sequencing. That was where i went wrong. i'll cat the other fastqs together ...
written 2 days ago by sa910
0
votes
2
answers
95
views
2
answers
Comment: C: can I map multiple (>2) fastq reads against and assembly using bwa?
... These are 4 separate runs of illumina output that I am supposed to analyse and compare to my pacbio genome that I sequenced. I want all 4 in the same SAM file. ...
written 8 days ago by sa910
2
votes
2
answers
95
views
5 follow
2
answers
can I map multiple (>2) fastq reads against and assembly using bwa?
... Hi I want to map the output of 4 separate illumina smrt cells against a pacbio reference genome using BWA. I've indexed the full genome. I can try run the the equivalent of this line, but using additional reads: bwa mem ref.fa read1.fq read2.fq > aln-pe.sam However, if I try bwa mem ...
assembly next-gen sequence bwa alignment written 12 days ago by sa910 • updated 8 days ago by swbarnes27.8k

Latest awards to sa91

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 820 users visited in the last hour