User: sohadb1357

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sohadb1357460
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Posts by sohadb1357

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Comment: C: Velvetoptimiser Can'T Find Velveth
... /home/ohad/per15/bin:/usr/lib/lightdm/lightdm:usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games ...
written 6.1 years ago by sohadb1357460
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Velvetoptimiser Can'T Find Velveth
... Hi I'm trying to use velvet optimiser, but for some reason I get the message: "Unable to find velveth, please ensure that velvet executables are in your PATH"", despite the fact that I copied velveth to the same directory. I searched answers on the web for hours, and so far this is the only answer ...
velvet written 6.1 years ago by sohadb1357460 • updated 6.1 years ago by SES8.1k
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How To Filter Mapped Reads With Samtools
... Hi How do I filter a bam file with some tools (Specifically -how I can remain with the unmapped reads only?). I have single-end mapping, I searched for hours but everywhere I see the suggestion of samtools view -u -f 4 that (as I understood) doing the oposite thing - filtering out the unmapped rea ...
samtools written 6.1 years ago by sohadb1357460 • updated 4 months ago by Simply Bioinformatics110

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