User: babankolte.22

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Posts by babankolte.22

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Comment: A: DESeq2 compare all levels
... Hi Kevin, The output of head (res1), res2, and res3 are the comparison that I have taken for analysis, but when I put this all together and assigned to one variable like same in your code i.e sigGenes and it giving an error. This is my comparison: res1 <- results(dds, contrast=c("condition", "T ...
written 9 weeks ago by babankolte.220
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Comment: A: DESeq2 compare all levels
... Hi Kevin, I am using your following code but getting error. I don't no why it is showing. Any help will be appreciated. log2cutoff <- 2 qvaluecutoff <- 0.05 sigGenes <- unique(c( rownames(subset(res1, padj<=qvaluecutoff & abs(log2FoldChange)>=log2cutoff)) ...
written 9 weeks ago by babankolte.220

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