User: sarahhunter

gravatar for sarahhunter
sarahhunter590
Reputation:
590
Status:
Trusted
Location:
Cambridge, UK
Scholar ID:
Google Scholar Page
Last seen:
2 years, 5 months ago
Joined:
5 years ago
Email:
s***********@gmail.com

Senior bioinformatics project manager, Illumina, Inc (2015- )

Clinical IT service team leader, NIHR Rare Diseases Bioresource (2014-2015)

Was Team leader at EMBL-EBI, leading the InterPro and Metagenomics resoruces. (2007-2014)

Posts by sarahhunter

<prev • 43 results • page 1 of 5 • next >
0
votes
3
answers
2.0k
views
3
answers
Comment: C: Downloading fasta sequences for PDB IDs in bulk
... The uniprot facility which I link to below is web-based and therefore works for any platform.  The limit of number of IDs you can give (in a file) is in the 10s of thousands, so you shouldn't have a problem.  If you do, contact uniprot help. ...
written 2.6 years ago by sarahhunter590
0
votes
3
answers
2.0k
views
3
answers
Answer: A: Downloading fasta sequences for PDB IDs in bulk
... Uniprot provides a facility to do bulk download through their website.  http://www.uniprot.org/uploadlists/ Through this feature you can get any sequence contained within the uniparc archive, including PDBseqs   ...
written 2.6 years ago by sarahhunter590
1
vote
3
answers
2.5k
views
3
answers
Answer: A: Next Generation Sequencing for Beginners
... EBI has a short online course on NGS here http://www.ebi.ac.uk/training/online/course/ebi-next-generation-sequencing-practical-course ...
written 3.0 years ago by sarahhunter590
1
vote
8
answers
3.9k
views
8
answers
Answer: A: Bioinformatics For Clinicians - What To Teach Them?
... You might find these pages from the UK's PHG foundation useful in deciding how to focus your course: http://www.phgfoundation.org/project/wgs "Recent advances in DNA sequencing technology are making rapid, affordable genome sequencing increasingly viable in health services. This will pave the way ...
written 3.1 years ago by sarahhunter590
0
votes
0
answers
1.3k
views
0
answers
Comment: C: Two software engineering jobs at Cambridge University/NIHR BioResource for Rare
... I'm going to bump these up again (not sure if that's the correct etiquette or not :-) ) but response so far has been less than hoped - there's another 2 weeks that these are open, so please apply if interested. ...
written 3.1 years ago by sarahhunter590
3
votes
0
answers
1.3k
views
0
answers
Job: Two software engineering jobs at Cambridge University/NIHR BioResource for Rare diseases
... There are two software engineering positions now open at the University of Cambridge that may be of interest to people on Biostars Please see: http://www.jobs.cam.ac.uk/job/5344/ and http://www.jobs.cam.ac.uk/job/5348/ for full details and how to apply The NIHR BioResource - Rare Diseases Translat ...
phenotyping genome uk job cambridge written 3.1 years ago by sarahhunter590
2
votes
1
answer
833
views
1
answers
Answer: A: Chemoinformatics workshops (on-site) that are still "alive"?
... EMBL-EBI occasionally runs Chemoinformatics workshops. See: http://www.ebi.ac.uk/training/past-courses-held-embl-ebi for a list of past courses (you can narrow it down by searching for "Chemoinformatics" in the box at the top). For example, this one, held at the end of 2013, is planned to be held a ...
written 3.1 years ago by sarahhunter590
0
votes
9
answers
4.2k
views
9
answers
Comment: C: The Organisation Of Really Contrived Acronyms (Orca)
... I always think of chocolate milk when I see "PSICQUIC" ...
written 4.3 years ago by sarahhunter590
2
votes
9
answers
4.2k
views
9
answers
Answer: A: The Organisation Of Really Contrived Acronyms (Orca)
... We were specifically instructed to create a resource that did what it said on the tin (or rather we were told that the name on the tin should clearly indicate what the resource did!) Hence, EBI metagenomics was called what it is, rather than one of it's original proposed names (e.g. GAIA - metaGeno ...
written 4.3 years ago by sarahhunter590
0
votes
1
answer
3.1k
views
1
answers
Comment: C: Sequence Blast Against Rfam Database
... Have you tried contacting the lovely Rfam folks with this question? (http://rfam.sanger.ac.uk/help#tabview=tab12) ...
written 4.3 years ago by sarahhunter590

Latest awards to sarahhunter

Autobiographer 3.2 years ago, has more than 80 characters in the information field of the user's profile.
Teacher 3.7 years ago, created an answer with at least 3 up-votes. For A: Large Tables In Supplementary Pdf In Journal Articles
Appreciated 4.5 years ago, created a post with more than 5 votes. For A: A Tree Viewer Software For The Gene Ontology Terms?
Good Answer 4.5 years ago, created an answer that was upvoted at least 5 times. For A: A Tree Viewer Software For The Gene Ontology Terms?
Teacher 4.5 years ago, created an answer with at least 3 up-votes. For A: A Tree Viewer Software For The Gene Ontology Terms?
Teacher 4.5 years ago, created an answer with at least 3 up-votes. For A: Large Tables In Supplementary Pdf In Journal Articles
Teacher 4.6 years ago, created an answer with at least 3 up-votes. For A: Get Species Information From Interopro Domain
Appreciated 4.7 years ago, created a post with more than 5 votes. For A: Am I Sabotaging Myself By Getting A Masters Instead Of A Phd?
Good Answer 4.7 years ago, created an answer that was upvoted at least 5 times. For A: Am I Sabotaging Myself By Getting A Masters Instead Of A Phd?
Teacher 4.7 years ago, created an answer with at least 3 up-votes. For A: Am I Sabotaging Myself By Getting A Masters Instead Of A Phd?

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 646 users visited in the last hour