User: Medhat

gravatar for Medhat
Medhat6.4k
Reputation:
6,370
Status:
Trusted
Location:
Poland
Website:
http://combio.pl/
Scholar ID:
Google Scholar Page
Last seen:
an hour ago
Joined:
4 years, 6 months ago
Email:
m*************@gmail.com

 Computational biology PhD student, Software engineer. love programming using Java, Python and R. thrive on challenges and live for breakthroughs (and coffee). working on  data analysis,genome assembly and comparative analysis.  also interested in virus evolution and mutations, phylogeny and reverse vaccines Where others say “that’s impossible”,I say “when do I start?” (usually after a cup of coffee).

Posts by Medhat

<prev • 679 results • page 1 of 68 • next >
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Comment: C: GREAT web server
... That is why I asked for the idea to show a point :) ...
written 2 days ago by Medhat6.4k
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Comment: C: GREAT web server
... > GREAT assigns biological meaning to a set of non-coding genomic > regions by analyzing the annotations of the nearby genes. Thus, it is > particularly useful in studying cis functions of sets of non-coding > genomic regions. If I may ask how you will use it for coding regions? what is ...
written 2 days ago by Medhat6.4k
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Comment: C: CNV Calling- CopywriteR
... I think there is issue with chromosome naming, can you please show the bam header ``` samtools view -H your_bam_file.bam ``` also check how they are named in the refernce I think they will be named ch1, ch2 .... ...
written 2 days ago by Medhat6.4k
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Answer: C: What are the challenges faced in bioinformatics research
... https://www.biostars.org/p/209321/#209341 ...
written 3 days ago by Medhat6.4k
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Comment: C: Bioidea - open on taking on jobs
... This should be the contact address? contact@bioidea.com.pl ...
written 3 days ago by Medhat6.4k
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Comment: C: How to characterize synonymous and non-synonymous substitution from variants dat
... please read this answer it will help: https://www.biostars.org/p/4827/#4828 after reading that, you could annotate your SNPs using for example: [VEP][1] or [SnpEff][2] both tool are very convenient [1]: http://www.ensembl.org/info/docs/tools/vep/index.html [2]: http://snpeff.sourcefo ...
written 10 days ago by Medhat6.4k
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Comment: C: coverage for unique transcript and df process
... ```!duplicated(transcript)``` this line actually removes duplication ...
written 10 days ago by Medhat6.4k
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Comment: C: coverage for unique transcript and df process
... I think you could use the [dplyr][1] library [1]: https://cran.rstudio.com/web/packages/dplyr/vignettes/introduction.html ...
written 10 days ago by Medhat6.4k
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Comment: C: what is the difference between bioinformatician and Postdoc in Bioinformatics
... Thanks this is really informative. ...
written 11 days ago by Medhat6.4k
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Comment: C: what is the difference between bioinformatician and Postdoc in Bioinformatics
... Away from your answer, the future career for Postdoc is to be PI "hopefully", but Bioinformatician can not be a PI am I right? ...
written 11 days ago by Medhat6.4k

Latest awards to Medhat

Popular Question 4 days ago, created a question with more than 1,000 views. For Interactive Web To Learn R
Popular Question 8 weeks ago, created a question with more than 1,000 views. For Interactive Web To Learn R
Appreciated 8 weeks ago, created a post with more than 5 votes. For C: Limit Upvotes Over A Certain Amount Of Hours
Teacher 8 weeks ago, created an answer with at least 3 up-votes. For A: Big Data Approaches For Bioinformatics
Scholar 8 weeks ago, created an answer that has been accepted. For A: How to find research teams regarding your field
Popular Question 10 weeks ago, created a question with more than 1,000 views. For Interactive Web To Learn R
Popular Question 11 weeks ago, created a question with more than 1,000 views. For Interactive Web To Learn R
Popular Question 11 weeks ago, created a question with more than 1,000 views. For Interactive Web To Learn R
Scholar 12 weeks ago, created an answer that has been accepted. For A: How to find research teams regarding your field
Great Question 12 weeks ago, created a question with more than 5,000 views. For What tools you use or know for PacBio Long Read error correction?
Great Question 3 months ago, created a question with more than 5,000 views. For What tools you use or know for PacBio Long Read error correction?
Prophet 3 months ago, created a post with more than 20 followers. For Will Python Take The Place Of R?
Teacher 4 months ago, created an answer with at least 3 up-votes. For A: Big Data Approaches For Bioinformatics
Scholar 4 months ago, created an answer that has been accepted. For A: How to find research teams regarding your field
Teacher 4 months ago, created an answer with at least 3 up-votes. For A: Big Data Approaches For Bioinformatics
Scholar 4 months ago, created an answer that has been accepted. For A: How to find research teams regarding your field
Teacher 4 months ago, created an answer with at least 3 up-votes. For A: Big Data Approaches For Bioinformatics
Appreciated 5 months ago, created a post with more than 5 votes. For C: Limit Upvotes Over A Certain Amount Of Hours
Commentator 6 months ago, created a comment with at least 3 up-votes. For C: Limit Upvotes Over A Certain Amount Of Hours
Scholar 6 months ago, created an answer that has been accepted. For A: How to find research teams regarding your field
Teacher 6 months ago, created an answer with at least 3 up-votes. For A: Big Data Approaches For Bioinformatics
Commentator 6 months ago, created a comment with at least 3 up-votes. For C: Limit Upvotes Over A Certain Amount Of Hours
Scholar 7 months ago, created an answer that has been accepted. For A: How to find research teams regarding your field
Teacher 7 months ago, created an answer with at least 3 up-votes. For A: Big Data Approaches For Bioinformatics
Appreciated 7 months ago, created a post with more than 5 votes. For C: Limit Upvotes Over A Certain Amount Of Hours

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