User: kmmistr1

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kmmistr110
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2 months ago
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7 months, 3 weeks ago
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k*******@bradford.ac.uk

Posts by kmmistr1

<prev • 21 results • page 1 of 3 • next >
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Comment: C: plotting top 10 Differentially expressed genes
... It gave me didfferent errors all the time with the same code later I realised it all started after I installed Rtools 40. I could neither run any of the existing package nor install new package including ggplot or heatmap and everytime it gave me different types of errors. But as of now I have reins ...
written 9 weeks ago by kmmistr110
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Comment: C: plotting top 10 Differentially expressed genes
... Thanks @caggtaagtat it worked. ...
written 9 weeks ago by kmmistr110
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plotting top 10 Differentially expressed genes
... hello everyone, I am running DESeq2 step for my RNAseq analysis in R, I have extracted the Differentially expressed genes with padj<0.01. There are total 46 DEGs with padj<0.01. Now I would like to plot top 10 or 15 DEGs in the same plot. Can anyone suggest me the type of plot and the way to d ...
R degs rna-seq rstudio plot written 10 weeks ago by kmmistr110 • updated 10 weeks ago by caggtaagtat1.3k
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Comment: A: Getting error while installing other packages in R after installing Rtools40 pac
... My R is still not working, I neither can use any of my previously installed pacakges nor can install new pacakge. The error keep saying "LoadLibrary failure: The specified module could not be found." ...
written 11 weeks ago by kmmistr110
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Comment: C: Getting error while installing other packages in R after installing Rtools40 pac
... I upgraded R version 4 and then installed Rtools40. But i am still getting same error saying LoadLibrary failure: The specified module could not be found. ...
written 11 weeks ago by kmmistr110
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Comment: C: Getting error while installing other packages in R after installing Rtools40 pac
... Hey I reinstalled the new version of R version 4.0.2 (2020-06-22). Then I tried to install the > BiocManager::install("DESeq2") Here is the error I got: Error in inDL(x, as.logical(local), as.logical(now), ...) : unable to load shared object 'C:/Program Files/R/R-4.0.2/library/ ...
written 12 weeks ago by kmmistr110
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Comment: C: Getting error while installing other packages in R after installing Rtools40 pac
... May be but now I have uninstalled it as it was creating error while installing other packages. After uninstalling Rtools40, when i tried to install other packages again, still I got the same error. Also my previously installed packages are not working. ...
written 12 weeks ago by kmmistr110
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Getting error while installing other packages in R after installing Rtools40 packages
... Hi everyone, I am facing problem installing any/other packages after I installed the package "Rtools40" in R version 3.6.1. Here is the error I get: Error in inDL(x, as.logical(local), as.logical(now), ...) : unable to load shared object 'C:/Program Files/R/R-3.6.1/library/stats/libs/x6 ...
R r packages installation error written 12 weeks ago by kmmistr110
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Comment: C: error related to coefficients while running DESeq2 in R
... Thanks Kevin, I got the result I wanted using your codes: coldata$condition <- factor(as.character(coldata$condition)) coldata$tissue <- factor(as.character(coldata$tissue)) And also I've realised the existence of spaces in my coldata. I tried my code after removing those spaces and ...
written 12 weeks ago by kmmistr110
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Comment: C: error related to coefficients while running DESeq2 in R
... Hey, I have edited my code in my post and I have also added the outputs and str(). Let me know if you want more information. Thanks. ...
written 3 months ago by kmmistr110

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