User: dljone02

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dljone020
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Posts by dljone02

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Comment: C: Using ATACseq to do motif analysis in the promoters of a gene set
... Ok thanks. Was more or less just concerned about using "bedtools intersect" with a dataset that is stranded vs not stranded....this is ok? ...
written 3 months ago by dljone020
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Using ATACseq to do motif analysis in the promoters of a gene set
... Hi, I have ATACseq data analyzed for my cell of interest. I also have RNAseq from my cells with/without stimulus. After doing differential gene expression from the RNAseq, I want to do motif enrichment in the promoters of this gene set (~4,000 genes). Specifically, I would like to use bedtools to i ...
atacseq bedtools rna-seq written 3 months ago by dljone020 • updated 3 months ago by h.mon30k

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