User: donnieDarko

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Posts by donnieDarko

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Comment: A: Biological Significance of Gene Clusters found from RNASeq Gene Expression data
... Thanks a lot sir. Can you propose some RNASeq time series datasets on human conditions ? It would be of great help. ...
written 4 days ago by donnieDarko0
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Comment: C: Clustering Technique for RNASeq time course gene expression data over multiple t
... But sir, wouldn't that be biologically incosistent ? ...
written 4 days ago by donnieDarko0
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RNA-Seq Time Course Gene Expression dataset
... Hi, 1. Can you guys suggest some prominent factorial time series gene expression dataset that include at least two biological conditions to be compared in a given time point and have multiple developmental patterns over time as the number of conditions on Human diseases ( like cancer, etc) Thanks ...
gene-expression rna-seq written 4 days ago by donnieDarko0
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Biological Significance of Gene Clusters found from RNASeq Gene Expression data
... Hi, I am very new to bioinformatics. I have applied 2-3 data mining/ machine learning techniques to detect gene clusters using RNASeq gene expression data. Similarly I also know it is possible to do promoter and pathway analysis or gene ontology on that data using machine learning/data mining algor ...
rna-seq clustering written 5 days ago by donnieDarko0
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Where can I find Time Series Multi-Omics human cancer datasets
... Hi, I want to perform data integration on time series multi-omics dataset. But I can't find time-series multi-omics datasets with "transcriptomic" data on human diseases or human conditions( like breast cancer, brain, etc.). All I can find is datasets of mouse conditions. Plz help. Dataset must ...
dataset multi-omics time series cancer written 6 days ago by donnieDarko0
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Comment: C: Clustering time course RNASeq data with replicates.
... Yes. It is a shorter version of the same. ...
written 19 days ago by donnieDarko0
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(Closed) Clustering time course RNASeq data with replicates.
... I have a RNASeq time course data with multiple time points and with multiple replicates at each time point. I want to perform clustering on the dataset. I have came across a package called [Dirichlet process Gaussian process mixture model (DPGP)][1]. But it accepts time course data with multiple tim ...
time series rna-seq clustering written 19 days ago by donnieDarko0
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Clustering Technique for RNASeq time course gene expression data over multiple timepoints with replicates at each timepoint.
... I want to do clustering on RNA-seq Time Series gene expression [Dataset][1] on WT MCF10a, Control VS Treat. Time course stimulation applied (0, 15, 40, 90, 180, 300 min). All samples made in triplicate. Dataset Link : https://github.com/daniel-spies/rna-seq_tcComp/tree/master/data I have studied a ...
time-series clustering rna-seq written 19 days ago by donnieDarko0

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