User: Ad fontes

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Ad fontes140
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Posts by Ad fontes

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Comment: C: hisat2: "(ERR): hisat2-align died with signal 6 (ABRT) "-message
... Ah, thanks, that makes sense! ...
written 4 weeks ago by Ad fontes140
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Comment: C: hisat2: "(ERR): hisat2-align died with signal 6 (ABRT) "-message
... Sorry, I don't think this is the answer: I am trying to match two sets of reads against the reference genome: why should it matter if I don't have the same number of reads in Read 1 and Read 2? ...
written 4 weeks ago by Ad fontes140
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Comment: C: hisat2: "(ERR): hisat2-align died with signal 6 (ABRT) "-message
... According to https://daehwankimlab.github.io/hisat2/manual/ we should use --rna-strandness F (or R) if we have single-end reads? ...
written 4 weeks ago by Ad fontes140
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Comment: A: hisat2: "(ERR): hisat2-align died with signal 6 (ABRT) "-message
... It is single-read, but even when I specify rna-strandness R I get the same answer. Any help would be greatly appreciated ...
written 4 weeks ago by Ad fontes140
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hisat2: "(ERR): hisat2-align died with signal 6 (ABRT) "-message
... Hi, I am completely new to this, any help will be greatly appreciated. After running hisat2, I get “Error, fewer reads in file specified with -1 than in file specified with -2 libc++abi.dylib: terminating with uncaught exception of type int (ERR): hisat2-align died with signal 6 (ABRT ...
rna-seq written 4 weeks ago by Ad fontes140 • updated 4 weeks ago by genomax92k
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Answer: A: Petition to demand that the Federal German Government release all genomic data o
... I suspect that when researchers now upload COVID-19 data [from Sheffield][1], [from Seattle][2], [from India][3], [or Brazil][4], etc, etc, to GISAID, they assume the data will be available for *every* interested researcher. It is not. As also documented in the blog linked above: if you disa ...
written 8 months ago by Ad fontes140
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Comment: C: Petition to demand that the Federal German Government release all genomic data o
... Correction: that is mr Bogner, not mr Berger. Perhaps it is time with a scientist at the helm of GISAID? ...
written 8 months ago by Ad fontes140
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Answer: A: Petition to demand that the Federal German Government release all genomic data o
... It might seem ironic, but when GISAID first started, it was as an improvement to WHO (World Health Organization), who at the time only shared some of its data with a few select scientist, see ["A nonscientist pushes sharing bird-flu data"][1] In 2006, after 70 scientist had asked in *Nature* for ...
written 8 months ago by Ad fontes140

Latest awards to Ad fontes

Good Answer 8 months ago, created an answer that was upvoted at least 5 times. For A: Petition to demand that the Federal German Government release all genomic data o
Good Answer 8 months ago, created an answer that was upvoted at least 5 times. For A: Petition to demand that the Federal German Government release all genomic data o
Teacher 8 months ago, created an answer with at least 3 up-votes. For A: Petition to demand that the Federal German Government release all genomic data o
Teacher 8 months ago, created an answer with at least 3 up-votes. For A: Petition to demand that the Federal German Government release all genomic data o

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