User: manjovial
manjovial • 0
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Posts by manjovial
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... Hi,
I am working on RNAseq data where my colleague has used two ERCC mixes , Mix 1 for tests and Mix 2 for WT. https://www.thermofisher.com/order/catalog/product/4456740
So, I have 92 ERCC transcripts with different expected fold change. I am not sure how to provide the information for two mixes wh ...
written 2.6 years ago by
manjovial • 0
• updated
19 months ago by
Kevin Blighe ♦ 45k
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... False negative here means genes which are really housekeeping (by prior knowledge or swissprot) are not showing signal intensities above decided cut-off value in all the tissues
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written 6.6 years ago by
manjovial • 0
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... Its human's gene expression data. I am looking for absolute present and absent (which is decided by taking a cut-off value) in both the cases. I am studying certain properties of tissue-specific genes and housekeeping genes and want to show that my results are gene expression data independent.
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written 6.6 years ago by
manjovial • 0
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... I work both on RNAseq data ( 10 tissues) and Microarray data ( 70 tissues) . The problem is that I find microarray data to be false negative for many of the housekeeping genes. The ratio of tissue-specific to housekeeping genes from RNAseq data comes around 1:10 whereas by microarray it comes 1:2 . ...
written 6.6 years ago by
manjovial • 0
• updated
6.6 years ago by
Michael Dondrup ♦ 46k
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For Tissue-Specific And Housekeeping Gene Ratio
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