Admin: Neilfws

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Neilfws47k
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Sydney, Australia
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http://nsaunders.wordp...
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4 hours ago
Joined:
7 years, 10 months ago
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Data scientist and bioinformatician based in Sydney, Australia.

Posts by Neilfws

<prev • 2,765 results • page 1 of 277 • next >
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Answer: A: biomaRt mmusculus_gene_ensembl dataset
... The same is true of the Ensembl BioMart website and of other hosts *e.g.* `www.ensembl.org`. It appears that in the latest build 91, mouse data has been moved to "Mouse strains 91", or `ENSEMBL_MART_MOUSE`: listDatasets(useMart(host = "www.ensembl.org", biomart = "ENSEMBL_MART_MOUSE")) ...
written 5 weeks ago by Neilfws47k
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Answer: A: error bar in bar plot ggplot2
... You need to define what you mean by "error bars". You also need to think about what it is that you want to visualize and the most effective way to do that. I am assuming that for each gene, you want to calculate a summary statistic - the mean? - of the values for HSC3, CMP1 and Gran1, and that "err ...
written 6 weeks ago by Neilfws47k
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Comment: C: error bar in bar plot ggplot2
... I edited the title as your code specifies a bar plot, not a boxplot. ...
written 6 weeks ago by Neilfws47k
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Comment: C: How to avoid conversion of gene symbols to date format in Excel
... I believe (but am not 100% certain) that Google sheets did not suffer from the auto-conversion issue when this thread was started, but now it does. The "trick", as with Excel, is to define the column variable type of course. Unfortunately, getting people to think about the nature of their data in a ...
written 7 weeks ago by Neilfws47k
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Comment: C: Pca From Vcf Files
... [SNPRelate has been removed][1] from CRAN. You need to install it [from Bioconductor now][2]. [1]: https://cran.r-project.org/web/packages/SNPRelate/index.html [2]: https://bioconductor.org/packages/release/bioc/html/SNPRelate.html ...
written 8 weeks ago by Neilfws47k
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Comment: C: esearch in reutils package: how to specify dataset?
... Cross-posted to https://stackoverflow.com/questions/44532441/esearch-in-reutils-package-how-to-specify-dataset/44533151 where I answered. ...
written 7 months ago by Neilfws47k
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Comment: C: Format For Distance Matrix For Running Hclust On R
... I imagine Biostars used to show the link to the duplicate, 5.7 years ago, as Stack Exchange sites do. ...
written 8 months ago by Neilfws47k
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Comment: C: StackExchange/Area51 bioinformatics is back
... Worth pointing out that voting to close does not necessarily upset or discourage users. They are often happy to discover that [an answer exists already][1]. [1]: http://imgur.com/q8b7xZT ...
written 8 months ago by Neilfws47k
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Comment: C: StackExchange/Area51 bioinformatics is back
... Seems to be an assumption by some that mechanisms to help people improve their questions equates with being hostile and condescending, and upsets or drives away users. In my experience, the more common result is that people do indeed edit and improve their questions. ...
written 9 months ago by Neilfws47k
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Comment: C: StackExchange/Area51 bioinformatics is back
... see, on stack exchange that would have been deleted inside 30 minutes ;) ...
written 9 months ago by Neilfws47k

Latest awards to Neilfws

Teacher 6 weeks ago, created an answer with at least 3 up-votes. For A: Code Golf: Digesting Fasta Sequences Into A Set Of Smaller Sequences
Scholar 6 weeks ago, created an answer that has been accepted. For A: Where Do I Find Genomic Coordinates For Human Cytogenetic Bands According To Ent
Appreciated 6 weeks ago, created a post with more than 5 votes. For A: Similarity Score Increase Or Decrease After Translation In Blast
Good Answer 6 weeks ago, created an answer that was upvoted at least 5 times. For A: Bio-Informatics Results Supporting Ongoing Evolution
Appreciated 11 weeks ago, created a post with more than 5 votes. For A: Is Blastall Only Using Blast, Not Blast+?
Appreciated 12 weeks ago, created a post with more than 5 votes. For A: Is Blastall Only Using Blast, Not Blast+?
Appreciated 4 months ago, created a post with more than 5 votes. For A: Rna Regulation Of Gene Transcription Database
Appreciated 4 months ago, created a post with more than 5 votes. For A: Rna Regulation Of Gene Transcription Database
Good Answer 4 months ago, created an answer that was upvoted at least 5 times. For A: Rna Regulation Of Gene Transcription Database
Good Answer 4 months ago, created an answer that was upvoted at least 5 times. For A: Rna Regulation Of Gene Transcription Database
Appreciated 5 months ago, created a post with more than 5 votes. For A: Rna Regulation Of Gene Transcription Database
Good Answer 5 months ago, created an answer that was upvoted at least 5 times. For A: Rna Regulation Of Gene Transcription Database
Good Answer 5 months ago, created an answer that was upvoted at least 5 times. For A: How Do I Do Simple Go Term Lookup Given A Gene (Or Mrna) Identifier?
Appreciated 7 months ago, created a post with more than 5 votes. For A: How To Derive Pan Proteome
Appreciated 7 months ago, created a post with more than 5 votes. For A: Can'T Locate Vcf.Pm Vcftools
Teacher 7 months ago, created an answer with at least 3 up-votes. For A: How To Get Fasta Format Using Fastafrombed Or How To Turn Linearized Fasta To Th
Teacher 8 months ago, created an answer with at least 3 up-votes. For A: How To Get Fasta Format Using Fastafrombed Or How To Turn Linearized Fasta To Th
Good Answer 8 months ago, created an answer that was upvoted at least 5 times. For A: Collapse Probes For Same Gene
Commentator 8 months ago, created a comment with at least 3 up-votes. For C: Any Way To Ncbi Blast Multiple Protein Sequences?
Appreciated 8 months ago, created a post with more than 5 votes. For A: Collapse Probes For Same Gene
Commentator 8 months ago, created a comment with at least 3 up-votes. For C: Any Way To Ncbi Blast Multiple Protein Sequences?
Appreciated 8 months ago, created a post with more than 5 votes. For A: Collapse Probes For Same Gene
Commentator 8 months ago, created a comment with at least 3 up-votes. For C: Any Way To Ncbi Blast Multiple Protein Sequences?
Teacher 9 months ago, created an answer with at least 3 up-votes. For A: How To Get Fasta Format Using Fastafrombed Or How To Turn Linearized Fasta To Th
Commentator 9 months ago, created a comment with at least 3 up-votes. For C: Any Way To Ncbi Blast Multiple Protein Sequences?

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