User: asamie333

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asamie3330
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Posts by asamie333

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Comment: C: Multiple DEGs matrices
... Apologies for late reply. So to be more clear, I have differentially expressed genes matrices (LFC, p value and fdr) following Deseq2 for a given experiment eg. mutant1/wt. And multiple such independent experiments eg. mutant2/wt2, mutant3/wt3 etc. Though the number of genes detected are more or les ...
written 5 weeks ago by asamie3330
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Multiple DEGs matrices
... Bioinformatics novice here. I have multiple excel files each with a DEGs table, for cell type X (from Sc Rnaseq). How to best merge the matrices? By gene column? Across conditions? Somehow normalize and standardize first? Since the matrices some from different experiments? Batch effect? Apologies f ...
rna-seq written 4 months ago by asamie3330

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