User: zak

gravatar for zak
zak 0
Reputation:
0
Status:
New User
Last seen:
5 hours ago
Joined:
9 months ago
Email:
b**************@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by zak

<prev • 15 results • page 1 of 2 • next >
0
votes
0
answers
54
views
0
answers
Comment: C: run a tool from python
... os.chdir(my path) \\ cmd = perl + pathBam + path... \\ subprocess.call(cmd, shell=true) ...
written 2 days ago by zak 0 • updated 2 days ago by GenoMax95k
0
votes
0
answers
54
views
0
answers
Comment: C: run a tool from python
... i knew i have to use os.chdir () but i dont know how to apply it. os.chdir (my path) and the line after I type my command and after my subprocess.call? ...
written 2 days ago by zak 0
0
votes
0
answers
54
views
0
answers
run a tool from python
... Hello, I have a command that it is executed normally in a directory where we will generate our results, when we want to do it from linux it suffices to be in the directory "result" and run the command (perl -input .....). I want to run it from python.... I created my variable: cmd = perl input... ...
sequence next-gen sequencing written 2 days ago by zak 0
0
votes
1
answer
101
views
1
answers
Comment: C: Merging multiple tsv files
... it works with python ? ...
written 3 days ago by zak 0
0
votes
1
answer
101
views
1
answers
Comment: C: Merging multiple tsv files
... i want to do it with python ...
written 3 days ago by zak 0
0
votes
1
answer
101
views
1
answers
Comment: C: Merging multiple tsv files
... thank you so much this is what i wanted to do exactly ...
written 3 days ago by zak 0
3
votes
1
answer
101
views
6 follow
1
answer
Merging multiple tsv files
... Hi! i have a multiple tsv files, do you have any methods to merge them in a single file with only header ? ...
genome next-gen sequencing written 4 days ago by zak 0 • updated 3 days ago by devarora290
0
votes
0
answers
60
views
0
answers
merge vcf files from different tools
... hello ! I want to merge two VCF files (from variant calling) that I obtained with two different tools GATK and TVC but the problem is for the same position, each tool returns me a different variant (not all positions) . do you have an idea to normalize between the two positions and which variant ...
next-gen snp sequencing written 9 days ago by zak 0
0
votes
0
answers
48
views
0
answers
(Closed) Concatenate VCF files
... Hello ! I want to concatenate several VCF files, do you have explicit python scripts to do it ? ...
snp sequencing written 10 days ago by zak 0
0
votes
0
answers
75
views
0
answers
Comment: C: how to run torrent variant caller on command line ?
... Yees it is installed ! but i don't understand the region bed files and the primer-trim ... it's necessary to running...do you have any idea ?. BTW I'm a beginner in bioinformatics ...
written 13 days ago by zak 0

Latest awards to zak

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1354 users visited in the last hour
_