User: elzow003

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elzow0030
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Posts by elzow003

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How to download multiple SRA files with prefetch in ubuntu?
... I created a download list grep -E 'SRR|ERR' XDR_169_ids.txt > downloads.txt ## Find SRAs from SRS: grep 'SRS' XDR_169_ids.txt | parallel "esearch -db sra -query {} | efetch --format runinfo | cut -d ',' -f 1 | grep SRR" >> downloads.txt ## Now make sure there are ...
rna-seq written 15 days ago by elzow0030 • updated 15 days ago by Istvan Albert ♦♦ 86k
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How can I plot gene ontology results using GOPlot package?
... Dear All, I have gene ontology results, produced using goana in R, I want to plot these results using the GOPlot package, which comes with a predetermined EC file and I can not enter my data, how can I use GOPlot to plot gene ontology results? Any suggestions will be greatly appreciated. ...
R rna-seq written 6 months ago by elzow0030 • updated 6 months ago by Kevin Blighe68k

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