User: Honey

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Honey200
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7 years, 2 months ago
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7 years, 9 months ago
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Posts by Honey

<prev • 33 results • page 1 of 4 • next >
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Mitochondrial Genome Annotation Difference?
... Following C: mitochondrial genome, I downloaded the annotation for mouse mitochondrial genome from http://uswest.ensembl.org/info/data/ftp/index.html and I found 13 genes as : EntrezGene ID Chromosome Name Transcript Start (bp) Transcript End (bp) Associated Gene Name MT 1 68 ...
genome mitochondria coordinates written 7.2 years ago by Honey200 • updated 7.2 years ago by Bert Overduin3.7k
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Is There A Webpage Or Server That Contains Data On Mouse Mitchondrial Genes With Coordinates And Gene Annotations
... I am trying to find web page or server/ database which will allow me to download the txt/ bed file for mouse mitchondrial genes with coordinates and gene annotations. I have tried google NCBI, EBI and could not find the same. Thanks ...
mitochondria genes written 7.3 years ago by Honey200 • updated 2.8 years ago by pschnepp0
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Agilent Tiling Array Analysis
... I have an agilent Chip on chip tiling array data and wonder if there is a GUI based workflow out which can help me to analyze the data. Thanks ...
array written 7.3 years ago by Honey200 • updated 7.3 years ago by Charles Warden7.9k
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Rrbs Is It Different From Bisulfite Seq
... I was wondering in some papers RRBS is used is it same as bisulfite seq in other papers? What is the difference? Thanks ...
written 7.3 years ago by Honey200 • updated 5.1 years ago by yupeng he80
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Gwas Data Download
... Which is the best database to download GWAS data? Thanks ...
gwas download written 7.3 years ago by Honey200 • updated 7.3 years ago by mulin0424.li120
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Comment: C: What Is The Best Tool For Power Analysis For An Rna-Seq Experimental Design
... Just in a simple language what are the basis of Scotty working. How it calculate out put from sample data. ...
written 7.3 years ago by Honey200
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Rna-Seq With Reference Genome But No Gene Annotations
... I have an RNAseq data from a fungi and the public database for that particular fungi has whole genome shotgun sequences. But there are no gene annotations. Is it possible to analyze RNAseq data for differential expression by aligning to the shotgun reference genome. Thanks ...
rnaseq seq written 7.3 years ago by Honey200 • updated 7.3 years ago by Nicolas Rosewick9.1k
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Comment: C: How To Analyse Epigenetics Data Using Bioinformatics Tools?
... I cannot resist myself, This is a true observation about Epigentics field. Even if you see literature there is no consistency how you will call differential methylation, Whatever suits you take that parameter/s. It is so superficial science. There are few people they can publish in high standard jo ...
written 7.4 years ago by Honey200
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Comment: C: Banner And Search Bar Before Post Question - Will This Be Helpful To Reduce Dupl
... The similar kind of option is there in seqanswer before you post question as you finish typing it will ask you review if these questions may be of help. That has helped a lot ...
written 7.4 years ago by Honey200
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Chipseq Motif In Set Of Genes
... I have a Chip-seq data and have identified a motif de-novo in MEME (http://meme.nbcr.net/meme/doc/meme-chip.html), I also have a list of genes from Chipseq data which are (promoters) get enriched. Obviously this list of genes is derived from Coordinates where peaks are detected. Now what I would li ...
chipseq motif written 7.4 years ago by Honey200 • updated 3.8 years ago by Biostar ♦♦ 20

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Student 7.4 years ago, asked a question with at least 3 up-votes. For What Is The Best Tool For Power Analysis For An Rna-Seq Experimental Design

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