User: The

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The90
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90
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Posts by The

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Comment: C: Sequence retrieval for a transgene
... I just mentioned what I did. whether I've asked or not the authors has been already answered, isn't it? ...
written 1 day ago by The90
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Comment: C: Sequence retrieval for a transgene
... Followed various links in that page, however none of them lead to the sequence of the gene construct ...
written 1 day ago by The90
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Sequence retrieval for a transgene
... I wish to retrieve the gene and /or protein sequence of a transgene used in Mouse. The following is the MGI link for it. Can anybody help me to fetch the sequence? http://www.informatics.jax.org/allele/MGI:3497947 Thanks ...
transgene sequence written 1 day ago by The90 • updated 1 day ago by Pierre Lindenbaum116k
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(Closed) How to find papers papers which are cited by one particular paper and have some particular keywords
... Hi all, Can somebody tell how to get references on a particular topic(by keyword) AND which are cited by one particular paper? I would prefer google Scholar as the search engine Thanks ...
literature search written 6 days ago by The90
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Comment: A: MSA of very long sequences?
... However given the length of sequences I guess it would be too much for most existing tools unless they are run on a high capacity computer cluster ...
written 11 months ago by The90
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Answer: A: MSA of very long sequences?
... "Muscle" mentions the following: "2.3 Large alignments If you have a large number of sequences (a few thousand), or they are very long, then the default settings of may be too slow for practical use. A good compromise between speed and accuracy is to run just the first two iterations of the algorit ...
written 11 months ago by The90
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Comment: C: Fetching Ribosomal protein sequences of Saccharomyces cerevisiae and E. Coli
... Thanks. This method works for my purpose ...
written 14 months ago by The90
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Fetching Ribosomal protein sequences of Saccharomyces cerevisiae and E. Coli
... Hello All, Can anybody suggest some way to get all the Ribosomal proteins from S. cerevisiae an E. coli, preferably in the UniProt format. Thanks ...
ribosomal protein sequence written 14 months ago by The90
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Answer: A: Future direction of Gene Set Enrichment Analysis
... One important point is correlation between gene expression so independence assumption doesn't hold true. Some methods addressed this issue https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3458527/ ...
written 17 months ago by The90
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Comparing time series expression data
... Hello I wish to know if you can suggest any articles /methods/software which are used for comparing two time series gene expression studies. One of the software STEM can compare gene clusters (of similar profiles) with clusters from the 2nd study. It calculates correlation between clusters and the ...
time series gene expression written 17 months ago by The90 • updated 6 months ago by Biostar ♦♦ 20

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Popular Question 9 months ago, created a question with more than 1,000 views. For Distance between two gene sets
Epic Question 10 months ago, created a question with more than 10,000 views. For R: Scaling the rows of a matrix
Popular Question 11 months ago, created a question with more than 1,000 views. For Distance between two gene sets
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Great Question 2.1 years ago, created a question with more than 5,000 views. For R: Scaling the rows of a matrix
Popular Question 3.3 years ago, created a question with more than 1,000 views. For Distance between two gene sets
Popular Question 3.3 years ago, created a question with more than 1,000 views. For Fisher'S Exact Test For Gene Rank Enrichment
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Scholar 3.8 years ago, created an answer that has been accepted. For A: Mapping multiple expression data on KEGG genes and metabolites

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