User: The

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The100
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Comment: C: Sequence retrieval for a transgene
... I just mentioned what I did. whether I've asked or not the authors has been already answered, isn't it? ...
written 8 weeks ago by The100
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Comment: C: Sequence retrieval for a transgene
... Followed various links in that page, however none of them lead to the sequence of the gene construct ...
written 8 weeks ago by The100
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Sequence retrieval for a transgene
... I wish to retrieve the gene and /or protein sequence of a transgene used in Mouse. The following is the MGI link for it. Can anybody help me to fetch the sequence? http://www.informatics.jax.org/allele/MGI:3497947 Thanks ...
transgene sequence written 8 weeks ago by The100 • updated 8 weeks ago by Pierre Lindenbaum117k
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(Closed) How to find papers papers which are cited by one particular paper and have some particular keywords
... Hi all, Can somebody tell how to get references on a particular topic(by keyword) AND which are cited by one particular paper? I would prefer google Scholar as the search engine Thanks ...
literature search written 9 weeks ago by The100
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Comment: A: MSA of very long sequences?
... However given the length of sequences I guess it would be too much for most existing tools unless they are run on a high capacity computer cluster ...
written 13 months ago by The100
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Answer: A: MSA of very long sequences?
... "Muscle" mentions the following: "2.3 Large alignments If you have a large number of sequences (a few thousand), or they are very long, then the default settings of may be too slow for practical use. A good compromise between speed and accuracy is to run just the first two iterations of the algorit ...
written 13 months ago by The100
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Comment: C: Fetching Ribosomal protein sequences of Saccharomyces cerevisiae and E. Coli
... Thanks. This method works for my purpose ...
written 16 months ago by The100
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Fetching Ribosomal protein sequences of Saccharomyces cerevisiae and E. Coli
... Hello All, Can anybody suggest some way to get all the Ribosomal proteins from S. cerevisiae an E. coli, preferably in the UniProt format. Thanks ...
ribosomal protein sequence written 16 months ago by The100
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Answer: A: Future direction of Gene Set Enrichment Analysis
... One important point is correlation between gene expression so independence assumption doesn't hold true. Some methods addressed this issue https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3458527/ ...
written 19 months ago by The100
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Comparing time series expression data
... Hello I wish to know if you can suggest any articles /methods/software which are used for comparing two time series gene expression studies. One of the software STEM can compare gene clusters (of similar profiles) with clusters from the 2nd study. It calculates correlation between clusters and the ...
time series gene expression written 19 months ago by The100 • updated 8 months ago by Biostar ♦♦ 20

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