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User: askari.arezou94

gravatar for askari.arezou94
Reputation:
30
Status:
New User
Location:
IRAN/AHVAZ
Last seen:
10 hours ago
Joined:
7 months, 2 weeks ago
Email:
a**************@yahoo.com

I am AREZOU

Ph.D. Student in the field of genetics.

my thesis title in M.A grade was "Identification and prediction Effects of SNPs on Protein structure with Insilico Methods"

Favorite fields: system biology, Pan-Genome analysis,RNA-Seq,

Posts by askari.arezou94

<prev • 49 results • page 1 of 5 • next >
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per base sequence content
... hello every one when i input my transcriptome reads in fastqc, per base sequence content don't have same content across all bases,what i should be done? ...
assembly next-gen rna-seq written 22 hours ago by askari.arezou94 • 30 • updated 22 hours ago by GenoMax ♦ 94k
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Comment: C: fastqc output analysis
... ok, I can find my responses in this comment. thank you ...
written 2 days ago by askari.arezou94 • 30
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Comment: C: fastqc output analysis
... thank you so much for good comment. ...
written 2 days ago by askari.arezou94 • 30
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fastqc output analysis
... ![enter image description here][1] [1]: ![https://ibb.co/866ZGYk][1] what is your idea about this output? I should trim this? my data is transcriptome and the length of reads are 50 [1]: https://i.ibb.co/pJJFNhq/Capture.jpg ...
assembly rna-seq sequencing written 3 days ago by askari.arezou94 • 30 • updated 3 days ago by ATpoint ♦ 44k
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Comment: C: trimm data before analysis
... thank you. my data is transcriptomic data ...
written 8 days ago by askari.arezou94 • 30
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Comment: C: trimm data before analysis
... in fastqc results all of the outputs should be confirmed? if per base sequence content and GC Content ,sequence duplicate level and overrepresent content is not confirmed, what should i do? ...
written 8 days ago by askari.arezou94 • 30
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Comment: A: trimm data before analysis
... thank you so much for your response. ...
written 8 days ago by askari.arezou94 • 30
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trimm data before analysis
... hello every one i have 25 raw data ,after quality control ,the quality of sequences was very high and don't have any adaptor, lenght of reads are 50 bp. it is necessary using from trimmomatic before start to analysis data? ...
assembly sequence rna-seq written 10 days ago by askari.arezou94 • 30
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Comment: C: Find depth of genome
... thank you for good comment. ...
written 25 days ago by askari.arezou94 • 30
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Find depth of genome
... hello everyone i have 14 whole genome, but i don't know anything about those coverage and sequencer platform's. in the first step it is important for me find depth of sequences and in second step ,how can find sequence platform?? thank you ...
genome assembly next-gen written 26 days ago by askari.arezou94 • 30 • updated 25 days ago by Mensur Dlakic • 8.1k

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