User: Mohawkjohn

gravatar for Mohawkjohn
Mohawkjohn30
Reputation:
30
Status:
New User
Location:
Austin, Texas, US
Website:
http://www.marcottelab...
Last seen:
7 years, 1 month ago
Joined:
7 years, 1 month ago
Email:
j***********@gmail.com

Virginia Tech graduate (computer science), University of Texas at Austin Ph.D. student (molecular biology / bioinformatics). NSF Fellow.

Posts by Mohawkjohn

<prev • 3 results • page 1 of 1 • next >
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Comment: C: How To Organize A Pipeline Of Small Scripts Together?
... Wow! I'm so glad you linked this! I've been looking for something just like BioRake. I, too, use rake tasks to automate a lot of stuff. I also really like using Rails in general, because it's incredibly easy to generate data displays and put my projects on the web. ...
written 7.1 years ago by Mohawkjohn30
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Comment: C: How Can I Efetch A Genpept Record To Get An Entrez Id Using An Sgd Identifier?
... I edited the question. How would a "general" search be run in BioRuby? I can't really find any documentation. ...
written 7.1 years ago by Mohawkjohn30
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How Can I Efetch A Genpept Record To Get An Entrez Id Using An Sgd Identifier?
... When I do a search on NCBI's website for S000000001, I get two records. When I try to efetch it in the protein database, I get no records. Apparently, this is not a primary ID. Is there a way to get the records via BioRuby using the yeast identifier? I do realize BioRuby/efetch is not ideal for t ...
ncbi eutils written 7.1 years ago by Mohawkjohn30 • updated 6.8 years ago by Neilfws47k

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