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Moderator: Emily_Ensembl

gravatar for Emily_Ensembl
Emily_Ensembl ♦ 18k
Reputation:
18,190
Status:
Trusted
Location:
EMBL-EBI
Website:
http://www.ensembl.org...
Twitter:
@Ensemily
Last seen:
29 minutes ago
Joined:
6 years, 5 months ago
Email:
e****@ebi.ac.uk

Outreach Project Leader for Ensembl. I can help you with anything Ensembl-related (or find someone who can).

Posts by Emily_Ensembl

<prev • 1,206 results • page 1 of 121 • next >
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Answer: A: Annotation Human genome transcripts, Transcript Support Level meaning
... As it says on the piece of documentation you linked to, TSL:NA means that the transcript was not analysed for one of the following reasons: * pseudogene annotation, including transcribed pseudogenes * human leukocyte antigen (HLA) transcript * immunoglobin gene transcript * T-cell receptor t ...
written 4 days ago by Emily_Ensembl ♦ 18k
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Comment: C: How I download data from the European Genome-phenome Archive (EGA)
... Perhaps nudge them again. You should expect to get a response in a week so it's not unreasonable to prod them. ...
written 8 days ago by Emily_Ensembl ♦ 18k
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Answer: A: ensembl - Gene ID - Transcript ID
... The colours are shown in the legend at the bottom of the image. ...
written 8 days ago by Emily_Ensembl ♦ 18k
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Comment: C: How I download data from the European Genome-phenome Archive (EGA)
... When did you contact EGA? ...
written 8 days ago by Emily_Ensembl ♦ 18k
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Answer: A: protein domain start-stop codons database
... The ones that the VEP has found will be the ones in the Ensembl database, so the way to get back those ones will be using [BioMart](http://www.ensembl.org/biomart/martview). ...
written 14 days ago by Emily_Ensembl ♦ 18k
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Comment: C: Pathogenic Variants in a Genomic interval
... It's because [there aren't any](http://jul2019.archive.ensembl.org/Homo_sapiens/Share/8c6d63db60cc9bd862e6313a6c092a0c?redirect=no;mobileredirect=no). ...
written 18 days ago by Emily_Ensembl ♦ 18k
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Job: Ensembl Web Back-end Project Leader
... Location: EMBL-EBI, Hinxton near Cambridge, UK Staff Category: Staff Member Contract Duration: 3 years Grading: 7 (monthly salary starting at £3,351.44 after tax) Closing Date: 14 August 2019 Reference Number: EBI01466 [Apply now](https://emea3.recruitmentplatform.com/apply-app/pages/ap ...
ensembl web job written 19 days ago by Emily_Ensembl ♦ 18k
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Answer: A: Pathogenic Variants in a Genomic interval
... You could use [BioMart](http://www.ensembl.org/biomart/martview/). Use the short variation database, filter by your genomic region and clinical significance. ...
written 19 days ago by Emily_Ensembl ♦ 18k
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Job: Ensembl Regulation Developer
... Location: EMBL-EBI, Hinxton near Cambridge, UK Staff Category: Staff Member Contract Duration: 3 years Grading: 5-6 (monthly salary starting at £2,631.99 - £2,944.48 after tax) Closing Date: 13 August 2019 Reference Number: EBI01473 [Apply now](https://www.embl.de/jobs/apply_page/?jobId ...
ensembl epigenetics epigenomics job written 20 days ago by Emily_Ensembl ♦ 18k
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Answer: A: uniprot variant classification DB retireve
... I'm afraid there's nothing the VEP can do to obtain that information. Does this offer anything that the ClinVar clinical significance doesn't already provide? ...
written 20 days ago by Emily_Ensembl ♦ 18k

Latest awards to Emily_Ensembl

Appreciated 3 days ago, created a post with more than 5 votes. For C: How to write well in science, specially in bioinformatics ?
Appreciated 11 days ago, created a post with more than 5 votes. For C: How to write well in science, specially in bioinformatics ?
Commentator 17 days ago, created a comment with at least 3 up-votes. For C: How to write well in science, specially in bioinformatics ?
Teacher 25 days ago, created an answer with at least 3 up-votes. For A: What Is A "Gene"? Redundancies In Refseq Versus Ensembl
Popular Question 4 weeks ago, created a question with more than 1,000 views. For Ensembl file formatting tool: tell us what you need
Teacher 5 weeks ago, created an answer with at least 3 up-votes. For A: What Is A "Gene"? Redundancies In Refseq Versus Ensembl
Scholar 5 weeks ago, created an answer that has been accepted. For A: (Where) can I download the Ensembl cross reference database?
Teacher 7 weeks ago, created an answer with at least 3 up-votes. For A: What Is A "Gene"? Redundancies In Refseq Versus Ensembl
Scholar 7 weeks ago, created an answer that has been accepted. For A: (Where) can I download the Ensembl cross reference database?
Teacher 7 weeks ago, created an answer with at least 3 up-votes. For A: What Is A "Gene"? Redundancies In Refseq Versus Ensembl
Good Answer 8 weeks ago, created an answer that was upvoted at least 5 times. For A: Venter Genome Vcf
Appreciated 9 weeks ago, created a post with more than 5 votes. For C: How to write well in science, specially in bioinformatics ?
Popular Question 12 weeks ago, created a question with more than 1,000 views. For ENCODE Users' Meeting
Scholar 3 months ago, created an answer that has been accepted. For A: (Where) can I download the Ensembl cross reference database?
Appreciated 3 months ago, created a post with more than 5 votes. For C: How to write well in science, specially in bioinformatics ?
Scholar 3 months ago, created an answer that has been accepted. For A: (Where) can I download the Ensembl cross reference database?
Teacher 3 months ago, created an answer with at least 3 up-votes. For A: What Is A "Gene"? Redundancies In Refseq Versus Ensembl
Scholar 3 months ago, created an answer that has been accepted. For A: (Where) can I download the Ensembl cross reference database?
Teacher 3 months ago, created an answer with at least 3 up-votes. For A: What Is A "Gene"? Redundancies In Refseq Versus Ensembl
Scholar 3 months ago, created an answer that has been accepted. For A: (Where) can I download the Ensembl cross reference database?
Teacher 3 months ago, created an answer with at least 3 up-votes. For A: What Is A "Gene"? Redundancies In Refseq Versus Ensembl
Scholar 3 months ago, created an answer that has been accepted. For A: (Where) can I download the Ensembl cross reference database?
Popular Question 3 months ago, created a question with more than 1,000 views. For ENCODE Users' Meeting
Good Answer 3 months ago, created an answer that was upvoted at least 5 times. For A: Venter Genome Vcf
Appreciated 3 months ago, created a post with more than 5 votes. For C: How to write well in science, specially in bioinformatics ?
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