Moderator: Egon Willighagen

gravatar for Egon Willighagen
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Location:
Maastricht
Website:
http://egonw.github.com/
Twitter:
egonwillighagen
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Last seen:
1 month ago
Joined:
10 years, 6 months ago
Email:
e***************@gmail.com

Post-doc working on Open Data, Open Source, and Open Standards in cheminformatics, chemometrics and bioinformatics. Projects I work on include the CDK, Bioclipse, WikiPathways, the Blue Obelisk Data Repository, and much more.

ORCID: https://orcid.org/0000-0001-7542-0286

Posts by Egon Willighagen

<prev • 393 results • page 1 of 40 • next >
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Job: Scientific programmer supporting COVID-19 WikiPathways project (Maastricht, The Netherlands, Europe)
... We are looking for a scientific programmer interested in joining the fight against COVID-19 and supporting us within the project “WikiPathways as a platform for COVID-19 pathway models” recently granted by the Dutch ZonMw funds. We focus on identifying underlying mechanisms explaining the difference ...
java job R pathvisio wikipathways xml written 4 weeks ago by Egon Willighagen5.2k
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Answer: A: cheminformatics and molecular docking
... Some pointers: - http://www.glycanstructure.org/ - https://www.genome.jp/kegg/glycan/ - https://www.ncbi.nlm.nih.gov/glycans/ - https://glytoucan.org/ ...
written 7 weeks ago by Egon Willighagen5.2k
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Answer: C: pathway analysis for metabolites
... For an overview of R packages, check out this open access book: https://rformassspectrometry.github.io/metaRbolomics-book/ For ID mapping, check out [BridgeDbR][1]. [1]: https://www.bioconductor.org/packages/release/bioc/html/BridgeDbR.html ...
written 7 weeks ago by Egon Willighagen5.2k
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Answer: A: PubChem RDF subjects doesn't have rdf:type predicates which doesn't make sense
... I've asked Evan Bolton and he [reminded][1] me that when [PubChem RDF was designed][2] that because of the size of PubChem, every triple constitutes a significant amount of network traffic, so a minimal model was created. [1]: https://twitter.com/EvanBolton/status/1290686243840327681 [2]: http ...
written 7 weeks ago by Egon Willighagen5.2k
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Answer: A: PubChem RDF subjects doesn't have rdf:type predicates which doesn't make sense
... I actually do not remember why we don't have a rdf:type to give the type, and only use it to link it to, for example, ChEBI [1]. But compounds with CIDs but no rdf:type can still be used: they still have a SMILES, InChI, etc. 0. Fu, G., Batchelor, C., Dumontier, M. et al. PubChemRDF: towards the se ...
written 7 weeks ago by Egon Willighagen5.2k
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Job: Postdoctoral researcher on COVID-19 molecular pathways in Maastricht / Netherlands
... We are looking for a postdoctoral researcher interested in joining the fight against COVID-19 and contributing to the project “WikiPathways as a platform for COVID-19 pathway models” recently granted by the [Dutch ZonMw funds][1]. We focus on identifying underlying mechanisms explaining the differen ...
postdoc covid-19 wikipathways netherlands job written 7 weeks ago by Egon Willighagen5.2k
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Comment: C: Junior researcher or post-doctoral researcher for the Food Nutrition Security Cl
... Link to vacancy page will be added tomorrow. ...
written 8 months ago by Egon Willighagen5.2k
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Job: Junior researcher or post-doctoral researcher for the Food Nutrition Security Cloud, Maastricht/NL
... The research position is part of the European FNS (Food Nutrition Security)-Cloud project. FNS-Cloud (http://www.fns-cloud.eu/) will overcome fragmentation problems by integrating existing FNS data, which is essential for high-end, pan-European FNS research, addressing FNS, diet, health, and consume ...
food nutrition job bioinformatics written 8 months ago by Egon Willighagen5.2k
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Comment: C: Multi omics dataset analyses, where to start? And methods to use?
... Since you mention metabolomics, you can also have a look at this recent paper: https://www.mdpi.com/2218-1989/9/10/200 ...
written 9 months ago by Egon Willighagen5.2k
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Job: Postdoctoral researcher: Infrastructure development for nanomaterial risk assessment
... Nanotechnologies are increasing our ability to improve our quality of life. Whether is it innovative medicine, ingredients in new beneficial products, or reducing the cost of smartphones, nanomaterials have found their way into our society. However, like any chemical of natural or synthetic source, ...
systems biology job nanotechnology ontology written 10 months ago by Egon Willighagen5.2k

Latest awards to Egon Willighagen

Great Question 8 months ago, created a question with more than 5,000 views. For How to visualize a list of genes on their chromosomal position?
Epic Question 9 months ago, created a question with more than 10,000 views. For How Do I Import Rdf Data Into R?
Popular Question 18 months ago, created a question with more than 1,000 views. For PhD Candidate 'Metabolomics data evaluation for Systems Biology'
Popular Question 19 months ago, created a question with more than 1,000 views. For PhD Candidate 'Metabolomics data evaluation for Systems Biology'
Popular Question 2.1 years ago, created a question with more than 1,000 views. For PhD Candidate 'Metabolomics data evaluation for Systems Biology'
Great Question 2.2 years ago, created a question with more than 5,000 views. For Bioinformatics Applications With The Raspberry Pi?
Popular Question 2.2 years ago, created a question with more than 1,000 views. For PhD Candidate 'Metabolomics data evaluation for Systems Biology'
Popular Question 3.2 years ago, created a question with more than 1,000 views. For How Do I Plot The Biostar Users Onto A Google Map?
Epic Question 3.2 years ago, created a question with more than 10,000 views. For How Do I Import Rdf Data Into R?
Popular Question 3.2 years ago, created a question with more than 1,000 views. For PhD Candidate 'Metabolomics data evaluation for Systems Biology'
Popular Question 3.2 years ago, created a question with more than 1,000 views. For Bioinformatics Applications With The Raspberry Pi?
Good Question 3.2 years ago, asked a question that was upvoted at least 5 times. For How Do I Plot The Biostar Users Onto A Google Map?
Popular Question 3.2 years ago, created a question with more than 1,000 views. For Is Bioinformatics Data Indeed More Open Than Cheminformatics Data?
Appreciated 3.6 years ago, created a post with more than 5 votes. For C: Is The Ipad Bioinformatics-Unfriendly?
Popular Question 3.7 years ago, created a question with more than 1,000 views. For What Is The Best Way To Find All (Public) Comments Made On A Particular Paper?
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Great Question 3.9 years ago, created a question with more than 5,000 views. For What Open Toxicology Databases Are Available?
Appreciated 4.2 years ago, created a post with more than 5 votes. For C: Is The Ipad Bioinformatics-Unfriendly?

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