User: Arpitha Hebbar

gravatar for Arpitha Hebbar
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3 years, 11 months ago
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5 years, 3 months ago
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Posts by Arpitha Hebbar

<prev • 26 results • page 1 of 3 • next >
35
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3
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78k
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23 follow
3
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How To Update R In Ubuntu ?
... i wanted to update my R version currently using 2.10. used the command sudo apt-get update R also tried with sudo apt-get upgrade R. both didnt work. please can you help to solve this.... ...
R ubuntu written 4.5 years ago by Arpitha Hebbar170 • updated 5 weeks ago by dexetra.in0
3
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1
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1.7k
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1
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How To Create Heatmap For Microarray Data ?
... i didnt get the meaning of the command heatmap.2(mat, trace = "none", col = rev(hmcol), margin=c(13,13)) what is the meaning of rev(hmcol) ? ...
R limma microarray heatmap written 4.6 years ago by Arpitha Hebbar170 • updated 3.4 years ago by Biostar ♦♦ 20
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Comment: C: How To Solve The Read.Maimages Error In Limma Package Of R ?
... it read the file very thankfull to u. ...
written 4.7 years ago by Arpitha Hebbar170
2
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0
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2.6k
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(Closed) How To Solve The Read.Maimages Error In Limma Package Of R ?
... i'm working on agilent data. for the analysis i am using R and bioconductor package limma. in read.maimages RG <-read.maimages(targets$FileName,source="agilent") m getting the following error Error in file(file, "r") : cannot open the connection In addition: Warning message: In file(file ...
agilent R microarray limma written 4.7 years ago by Arpitha Hebbar170 • updated 4.5 years ago by Biostar ♦♦ 20
0
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Comment: C: How To Download Dataset For The Microarray Data Analysis From Ncbi For Affymetri
... cant i use limma package for GEO datasets ? ...
written 4.7 years ago by Arpitha Hebbar170
2
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1
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3.0k
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1
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How To Download Dataset For The Microarray Data Analysis From Ncbi For Affymetrix ?
... hello, how to download affymetrix microarray data (cancer data compared with normal data should contain maximum of 4 samples ) from the ncbi ? and how the data input file should be ? m using R program limma package in windows for the analysis purpose. please help. ...
ncbi download limma affymetrix microarray written 4.7 years ago by Arpitha Hebbar170 • updated 4.7 years ago by Sean Davis24k
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Comment: C: Is There A Tutorial/Guide Explaining How To Create A Draft Genome From Assembled
... hey thnx ... m working on a bacterial genome S.aureus. m using de novo method. actually i tried PAGIT. but while running the image.pl it is showing the error cant execute fasta2singleLine.pl. i used the input file which is generated from the abacas. i tried both with .fasta file as well as .contigs ...
written 5.1 years ago by Arpitha Hebbar170
0
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Comment: C: Is There A Tutorial/Guide Explaining How To Create A Draft Genome From Assembled
... yes exactly. how to assemble the contigs. m working on Staph aureus. ...
written 5.1 years ago by Arpitha Hebbar170
4
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2
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2.5k
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Answer: A: Alternatives To Newbler To Assemble Ion Torrent Reads?
... hey, u can use MIRA (Mimicking Intelligent Read Assembly) software. works well with 454, solexa, ion-torrent, pacific bios. its a freely available standalone unix based software. u can download it from this link. http://sourceforge.net/projects/mira-assembler/files/. working procedure also very elab ...
written 5.1 years ago by Arpitha Hebbar170
1
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1
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Is There A Tutorial/Guide Explaining How To Create A Draft Genome From Assembled Contigs?
... hello I have a contigs. (reads are generated from Ion-Torrent PGM) i have to create a draft genome from the contigs. Which software will be help full ? i have no idea about this. Please can u help.... ...
ngs contigs ion-torrent written 5.1 years ago by Arpitha Hebbar170 • updated 5.1 years ago by Josh Herr5.5k

Latest awards to Arpitha Hebbar

Popular Question 4.5 years ago, created a question with more than 1,000 views. For How To Update R In Ubuntu ?
Teacher 5.1 years ago, created an answer with at least 3 up-votes. For A: Alternatives To Newbler To Assemble Ion Torrent Reads?

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