User: Christopher Bottoms

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Posts by Christopher Bottoms

<prev • 19 results • page 1 of 2 • next >
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Comment: C: Test data for bcl2fastq
... Thanks! I haven't used BaseSpace, but perhaps I should look into a trial if the data is redistributable. Do they provide raw bcl data? ...
written 4 days ago by Christopher Bottoms180
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Test data for bcl2fastq
... Is there test data available for bcl2fastq? I found a script in the bcl2fastq distribution (i.e. `src/bcl2fastq/data/generator/mkdata.sh`) that generates bcl.bgzf files and a s_1.bci file (i.e. Lane BCI file, the "BCI Files" described in the [bcl2fastq user guide][1]), but I'm not sure how to create ...
bcl2fastq sequencing written 4 days ago by Christopher Bottoms180
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Comment: C: Counting Kmers With Reverse Complement?
... @Bob. If you use the -C flag, then one occurrence of ACCT and one occurrence of AGGT would count as two occurrences of a ACCT/AGGT kmer. The output file will just show ACCT or AGGT with the count, but I'm not sure how it decides which to use. ...
written 5.6 years ago by Christopher Bottoms180
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Answer: A: Should Biostar Be Switched Over To The Stackexchange Network?
... Yes to the migration. I assume that we'll be able to connect our biostar account with our other Stack Exchange accounts. ...
written 5.9 years ago by Christopher Bottoms180
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Comment: C: How Do I Post Inline Links In Comments?
... Google ...
written 6.0 years ago by Christopher Bottoms180
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Comment: C: Agile Programming For Bioinformaticians - Any Suggestions?
... See also the book "The Art of Agile Development" (http://jamesshore.com/Agile-Book) ...
written 6.0 years ago by Christopher Bottoms180
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Comment: C: How Do I Post Inline Links In Comments?
... I guess verbose is the only way to go: "The Art of Agile Development" (see http://jamesshore.com/Agile-Book). ...
written 6.0 years ago by Christopher Bottoms180
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Comment: C: How Do I Post Inline Links In Comments?
... The Art of Agile Development ...
written 6.0 years ago by Christopher Bottoms180
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Comment: C: How Do I Post Inline Links In Comments?
... The Art of Agile Development ...
written 6.0 years ago by Christopher Bottoms180
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Comment: C: How Do I Post Inline Links In Comments?
... Agile site ...
written 6.0 years ago by Christopher Bottoms180

Latest awards to Christopher Bottoms

Appreciated 5.5 years ago, created a post with more than 5 votes. For A: Should Biostar Be Switched Over To The Stackexchange Network?
Appreciated 5.5 years ago, created a post with more than 5 votes. For What Tools Are Available For Analyzing Bisulfite Data?
Great Question 5.5 years ago, created a question with more than 5,000 views. For What Tools Are Available For Analyzing Bisulfite Data?
Good Question 5.5 years ago, asked a question that was upvoted at least 5 times. For What Tools Are Available For Analyzing Bisulfite Data?
Good Answer 5.5 years ago, created an answer that was upvoted at least 5 times. For A: Should Biostar Be Switched Over To The Stackexchange Network?
Popular Question 5.5 years ago, created a question with more than 1,000 views. For What Tools Are Available For Analyzing Bisulfite Data?
Teacher 5.5 years ago, created an answer with at least 3 up-votes. For A: Should Biostar Be Switched Over To The Stackexchange Network?
Student 5.5 years ago, asked a question with at least 3 up-votes. For What Tools Are Available For Analyzing Bisulfite Data?

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