User: j.matt.franklin
j.matt.franklin • 0
- Reputation:
- 0
- Status:
- New User
- Last seen:
- 2 hours ago
- Joined:
- 7 months, 2 weeks ago
- Email:
- j**************@gmail.com
Profile information, website and location are not shown for new users.
This helps us discourage the inappropriate use of our site.
Posts by j.matt.franklin
<prev
• 7 results •
page 1 of 1 •
next >
0
votes
1
answer
59
views
1
answers
... Thanks! This is helpful. ...
written 2 days ago by
j.matt.franklin • 0
1
vote
1
answer
59
views
1
answer
... What is the best way to determine arbitrary-length uniqueness for sequences?
Let's say I have 100 DNA sequences, ranging from 300bp to 100kb. I want to know all the regions of each sequence that is unique among this set. The individual sequences contain significant repeat DNA, so I want to know wh ...
written 3 days ago by
j.matt.franklin • 0
• updated
3 days ago by
Mensur Dlakic • 9.1k
0
votes
1
answer
64
views
1
answers
... Wow that worked perfectly! Thanks. ...
written 9 days ago by
j.matt.franklin • 0
2
votes
1
answer
64
views
1
answer
... I'm trying to access the complete ncbi tissue expression dataset. When you look at any individual gene, NCBI provides a
expression chart to look at rna-seq counts across tissues. For example, https://www.ncbi.nlm.nih.gov/gene/6304
You can see higher expression in brain and lymph nodes.
I contact ...
written 9 days ago by
j.matt.franklin • 0
0
votes
0
answers
173
views
0
answers
... I am trying to annotate a human genome.
There's some recent papers that have assembled the human genome from long-read sequencing. I can get the assembly from NCBI. There's a provided gbff file, but it doesn't include annotations of the actual human genes.
What's the most standard way for me to ...
written 12 weeks ago by
j.matt.franklin • 0
0
votes
0
answers
133
views
0
answers
... Hi I'm running galaxy locally. I am trying to get the Trackster visualization tool to work.
The installation instructions are posted here: https://galaxyproject.org/visualization-setup/
When I attempt to run Trackster, I receive and error that bedtools cannot be found:
PATH_TO_JOBS/tool_script.s ...
written 3 months ago by
j.matt.franklin • 0
• updated
3 months ago by
Biostar ♦♦ 20
1
vote
1
answer
281
views
1
answer
... Hi all,
I'm very new to bio-informatics, but have many years of coding experience. I am studying un-referenced parts of the genome. I.e. satellite repeats which aren't included in reference genomes. I want to align some raw chip seq data to some specific set of sequences. Basically, I want to make ...
written 7 months ago by
j.matt.franklin • 0
• updated
6 months ago by
Biostar ♦♦ 20
Latest awards to j.matt.franklin
No awards yet. Soon to come :-)
Use of this site constitutes acceptance of our User
Agreement
and Privacy
Policy.
Powered by Biostar
version 2.3.0
Traffic: 2375 users visited in the last hour