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Comment: Comment: My PCA plot is weird: PC1 with 98.684% variance and PC2 with 0.582% variance
9 weeks ago by gglim ▴ 220
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Answer: Answer: How people usually perform scRNA Seq Analysis on HPC?
10 months ago by gglim ▴ 220
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1.7k
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Comment: Comment: Help with subset seurat object by a column in metadata
12 months ago by gglim ▴ 220
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2.1k
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Answer: Answer: ATAC-seq peaks centered between TSS and TES
12 months ago by gglim ▴ 220
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736
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Answer: Answer: Finding gtf file for safflower
14 months ago by gglim ▴ 220
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807
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Comment: Comment: Monocle3 - gene expression dot plot (ggplot2 equivalent)
15 months ago by gglim ▴ 220
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1.4k
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Comment: Comment: Bulk RNA-Seq Data That's Only Tumors (No Normal/Reference)?
15 months ago by gglim ▴ 220
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2.0k
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Comment: Comment: How to find transcription factors list?
16 months ago by gglim ▴ 220
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2.0k
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Comment: Comment: How to find transcription factors list?
16 months ago by gglim ▴ 220
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2.0k
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Answer: Answer: How to find transcription factors list?
16 months ago by gglim ▴ 220
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1.2k
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Answer: Answer: Speed of Cell-Cell interaction analysis on scRNA-seq data
16 months ago by gglim ▴ 220
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2.4k
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Comment: Comment: How do i calculate the mean of triplicates in a data.frame based on pattern?
16 months ago by gglim ▴ 220
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2.4k
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Answer: Answer: How do i calculate the mean of triplicates in a data.frame based on pattern?
16 months ago by gglim ▴ 220
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2.4k
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Comment: Comment: Cut&Run and heatmap
16 months ago by gglim ▴ 220
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1000
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Comment: Comment: Spearman correlation for ATAC data
19 months ago by gglim ▴ 220
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9.4k
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Comment: Comment: CUT&Tag data processing: peak caller choice and typical peak size profile
2.4 years ago by gglim ▴ 220
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1
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9.4k
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Comment: Comment: CUT&Tag data processing: peak caller choice and typical peak size profile
2.4 years ago by gglim ▴ 220
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1
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9.4k
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Comment: Comment: CUT&Tag data processing: peak caller choice and typical peak size profile
2.4 years ago by gglim ▴ 220
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3.3k
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Comment: Comment: When making a heat map with normalized data, should you still see the control da
3.6 years ago by gglim ▴ 220
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1
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3.3k
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Comment: Comment: When making a heat map with normalized data, should you still see the control da
3.6 years ago by gglim ▴ 220
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2.9k
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Answer: Answer: gene set enrichment in clusterprofiler
3.7 years ago by gglim ▴ 220
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0
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1.8k
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Comment: Comment: Weird output of DESeq2 when using single one sample from one group agains the ot
3.7 years ago by gglim ▴ 220
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2.0k
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Comment: Comment: Why the most suitable UMAP PCs for my dataset is only Three?
3.8 years ago by gglim ▴ 220
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1.7k
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Comment: Comment: How to define open or close gene in ATAC-seq?
3.9 years ago by gglim ▴ 220
2
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2
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1.7k
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How to define open or close gene in ATAC-seq?
ChIPpeakAnno ATAC-seq MACS2
3.9 years ago by gglim ▴ 220
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1.7k
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Comment: Comment: Subsetting/filtering a tibble by a combination of data stored in a second tibble
3.9 years ago by gglim ▴ 220
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0
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1.4k
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Comment: Comment: Plot genes derived from time course experiment as line graph
4.0 years ago by gglim ▴ 220
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1.4k
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Answer: Answer: Plot genes derived from time course experiment as line graph
4.0 years ago by gglim ▴ 220
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0
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794
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Comment: Comment: Bugs? on GSEA anaylsis
4.0 years ago by gglim ▴ 220
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0
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4.8k
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Comment: Comment: Need help to remove NA values from data frame
4.1 years ago by gglim ▴ 220
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4.3k
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Comment: Comment: Functional enrichment analysis, visual representation with barplot: error: argu
4.1 years ago by gglim ▴ 220
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1.2k
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Comment: Comment: (ERR): bowtie2-align died with signal 24 (XCPU) (core dumped)
4.1 years ago by gglim ▴ 220
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1
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1.4k
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Comment: Comment: SIte Mutations in a 3D protein structure to locate the core of mutations
4.1 years ago by gglim ▴ 220
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0
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1.7k
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Comment: Comment: help with mosaic plots
4.1 years ago by gglim ▴ 220
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1
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1.7k
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Answer: Answer: help with mosaic plots
4.1 years ago by gglim ▴ 220
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0
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11k
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Comment: Comment: merge chipseq peaks with bedtools/other tool
4.1 years ago by gglim ▴ 220
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1.6k
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Answer: Answer: Bedtools Intersect
4.4 years ago by gglim ▴ 220
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0
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2.9k
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Comment: Comment: HISAT2 Genome indexing
4.4 years ago by gglim ▴ 220
2
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1
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2.9k
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Comment: Comment: HISAT2 Genome indexing
4.4 years ago by gglim ▴ 220
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3.3k
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Comment: Comment: pheatmap troubles...!!
4.5 years ago by gglim ▴ 220
1
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1
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1.1k
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Answer: Answer: Modifying dataframe in R based on Unique values in 2nd column
4.5 years ago by gglim ▴ 220
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1
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3.8k
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Comment: Comment: enrichGO() error: unable to find an inherited method for function ‘keytypes’ fo
4.5 years ago by gglim ▴ 220
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0
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1.3k
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Answer: Answer: How to add GO annotation terms (molecular function, component, biological proces
4.5 years ago by gglim ▴ 220
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1
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3.8k
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Comment: Comment: enrichGO() error: unable to find an inherited method for function ‘keytypes’ fo
4.5 years ago by gglim ▴ 220
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2.0k
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Comment: Comment: How to sort multi columns on long dataframe in R
4.5 years ago by gglim ▴ 220
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1.3k
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Answer: Answer: Display alignment BAM file
4.5 years ago by gglim ▴ 220
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5.4k
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Comment: Comment: How to get output of annotated genes from ChIPseeker tool
4.5 years ago by gglim ▴ 220
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1.1k
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Answer: Answer: Gene locations do not match
4.5 years ago by gglim ▴ 220
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2.1k
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Answer: Answer: ChIPSeeker Help for Annotating Peaks
4.5 years ago by gglim ▴ 220
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0
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1.3k
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Comment: Comment: Batch effect removal and meta-analysis for RNA_seq
4.5 years ago by gglim ▴ 220
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