User: Martin Fitzpatrick
- Birmingham, United Kingdom
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- Last seen:
- 3 years, 11 months ago
- 5 years, 12 months ago
Post-doctoral bioinformatics researcher at Universiteit Utrecht, Netherlands. Previously completed a PhD at the University of Birmingham, UK in the metabolomics of inflammatory diseases. Keen open-source programmer and developer behind Pathomx a workflow-based desktop analysis tool, developed to automate the processing of NMR spectra. Working mainly in Python, MATLAB and R.
Posts by Martin Fitzpatrick
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... Bit late to this party but I've recently developed Wooey a simple tool for creating "Web UIs" for command line scripts. It's based on the similarly named Gooey which automatically creates standard desktop UIs from Python commandline scripts. For Python scripts Wooey inherits that ability and allows ...
... What is Pathomx?
Pathomx is a workflow-based metabolomics analysis tool. It has been developed as part of my PhD to enable rapid visualisation and interpretation of metabolic data within a pathway context.
The latest release (v2.5) provides a number of novel features:
Workflow based data explor ...
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