User: apekshasharma7777

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Posts by apekshasharma7777

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Comment: A: Blast - Formatting Output
... Hi, Is there any way to look for the sequence variation using the above command? ...
written 2 days ago by apekshasharma77770
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Comment: C: Blast output representation
... Say for showing the sequence similarity or to show the orthologs. Or, to show sequence variation between the orthologs. Is there any way for me to show the common genes and the unique genes from the output? ...
written 7 days ago by apekshasharma77770
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Blast output representation
... Hi, Is it possible to represent the blast output I got in the form of a histogram or pie-chart? If yes, then how? I have the output using a local version of blast. I have the outputs in a pairwise alignment format as well as the one displaying the concise results. ...
alignment written 7 days ago by apekshasharma77770
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Comment: C: using a local version of blast
... I do have orthologs in the output. I need to find a way on how to find the sequence similarity between those orthologs. Is there any way for me to find the similarity. I used a local version of BLAST. My output includes percent identity, evalue, bit-score and query coverage. ...
written 12 days ago by apekshasharma77770
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using a local version of blast
... Hi, I carried out BLASTp using a local version of BLAST for ebola and zaireebola to look for orthologous genes. Are orthologs all those genes that have a percent identity above 100%? How can I find the sequence similarity between the orthologs? ...
assembly sequence written 13 days ago by apekshasharma77770 • updated 13 days ago by lieven.sterck8.5k

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