User: luckysardar171

luckysardar171 • 0

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Posts by luckysardar171

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Finding different normalization approaches and choose which one is better

... Hello, I am working on single cell RNA seq analysis wanted to normalize my read count which are coming from HTseq, working on different methods of normalization such as TMM(edgeR), RLE(DEseq2), scran, SCnorm, linnorm, quantile normalization how to choose which one is better, and also how I can show ...

next-gen sequence rna-seq sequencing written 4 days ago by luckysardar171 • 0 • updated 4 days ago by RamRS ♦ 30k

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Normalization of single cell allele counts RNA-seq analysis

... Hi guys, I 'm working on single cell allelic counts RNAseq data with the heterogenous cell population and I have the allelic raw read read count files for example AlleleA and AlleleB, my objective is to do genome wide analysis, for downstream I have to normalize the data. I am thinking of trying De ...

sequence R next-gen rna-seq snp written 4 days ago by luckysardar171 • 0

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