User: Jorjial
Jorjial • 280
- Reputation:
- 280
- Status:
- Trusted
- Location:
- Valencia, Spain
- Website:
- http://www.bioinformat...
- Last seen:
- 4 years ago
- Joined:
- 10 years, 1 month ago
- Email:
- j******@gmail.com
My twitter is @jorjial
Posts by Jorjial
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... IGENOMIX is a company that provides advanced services in reproductive genetics. Our broad experience and qualifications make us one of the global leaders in this field, and we guarantee we will offer you effective solutions to different infertility problems. Our bioinformatics department is seeking ...
written 4.1 years ago by
Jorjial • 280
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... IGENOMIX is a company that provides advanced services in reproductive genetics. Our broad experience and qualifications make us one of the global leaders in this field, and we guarantee we will offer you effective solutions to different infertility problems. Our bioinformatics department is seeking ...
written 4.9 years ago by
Jorjial • 280
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Comment:
C: Nextseq for analysts
... Thanks a lot! I was very useful for me!
...
written 5.4 years ago by
Jorjial • 280
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... This could be a quick solution. But, when you have a region covered by several amplicons, if you do not trim the primers, the variant fraction of the variants overlapping with primers can be underestimated and you can have some false negatives. If you trim the primers, the variant fraction will be t ...
written 5.4 years ago by
Jorjial • 280
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... I do not know any tool. I guess you can try Pierre Lindenbaum's one.
...
written 5.4 years ago by
Jorjial • 280
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... From my experience, the best way to do it is to trim the primers after alignment. In this way, the amplicon primers help the aligner to align well the indels at the edge of the amplicons. After the alignment, you can trim the primers if you know the sequence or the start and end position in the geno ...
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... You can use the R package VennDiagram to plot the Venn diagrams and use shiny from RStudio to visualise the results in a web browser dynamically. In the web page created with Shiny, you can show the lists and let the users to create their own plots.
...
written 6.1 years ago by
Jorjial • 280
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Answer:
A: remove fasta file heading
... If you now that the part you want to delete starts with "|", you can use sed in the terminal:
sed 's/|.*$//' file.fasta > new_file.fasta
What you are doing is to delete all the characters from "|" to the end of the line.
I hope this helps
...
written 6.2 years ago by
Jorjial • 280
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... Job description
A position of Bioinformatician is available at Sophia Genetics. The company offers solutions for the secure storage and analysis of patient genome sequence information to enable its effective, confidential application to personalized healthcare. The jobholder will be involved in cli ...
written 6.8 years ago by
Jorjial • 280
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... Sophia Genetics SA helps clinical laboratories that perform routine clinical genetic analysis for personalized healthcare to overcome the cost and complexity related to the bioinformatics analysis, highly secured banking and reliable interpretation of the massive quantity of patient data generated b ...
written 7.3 years ago by
Jorjial • 280
Latest awards to Jorjial
Popular Question
4.8 years ago,
created a question with more than 1,000 views.
For Bioinformatician Position In Sophia Genetics Sa. Lausanne, Switzerland
Popular Question
6.1 years ago,
created a question with more than 1,000 views.
For Bioinformatician Position In Sophia Genetics Sa. Lausanne, Switzerland
Popular Question
6.1 years ago,
created a question with more than 1,000 views.
For Bam Files Of Exomes From 1000 Genomes Project
Popular Question
6.1 years ago,
created a question with more than 1,000 views.
For Two Bioinformatician Job Offers In Sophia Genetics - Lausanne (Switzerland)
Student
6.7 years ago,
asked a question with at least 3 up-votes.
For Bam Files Of Exomes From 1000 Genomes Project
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