User: Lhl
Lhl • 730
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Posts by Lhl
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... Have you sorted out? ...
written 22 months ago by
Lhl • 730
0
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... Hi Apelin20.
I am doing the same thing to orthomcl2.0 output -- groups.txt.
Have you, by any chance,, found any other way of processing the output for downstream analyses? ...
written 2.3 years ago by
Lhl • 730
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... I ran into the same error,
I wonder if you have solved the issue.
...
written 2.3 years ago by
Lhl • 730
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... Have you tried genBlastA/G ?
(She et al., 2011) genBlastG: using BLAST searches to build homologous gene models. Bioinformatics. ...
written 2.5 years ago by
Lhl • 730
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... If you want to do this locally, you can download idmapping file form Uniprot ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/idmapping/. Then with some simple awk/grep unix commands or a couple of python/perl scripts, you will be able to extract uniprot id(s) of the corresp ...
written 2.6 years ago by
Lhl • 730
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5
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... 1. KEGG mapper convert ID
http://www.genome.jp/kegg/tool/conv_id.html
2. uniprot Retrieve/ID mapping
www.uniprot.org/uploadlists ...
written 2.6 years ago by
Lhl • 730
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Answer:
A: Blast E Value Calculation
... have a read of this
http://homepages.ulb.ac.be/~dgonze/TEACHING/stat_scores.pdf ...
written 2.7 years ago by
Lhl • 730
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6
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... what is the command used to create this picture?
Thanks.
Elzed
...
written 4.0 years ago by
Lhl • 730
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3
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... STAR manual says 'If you have stranded RNA-seq data, you do not need to use any specific STAR options.' i do not understand how it distinguishes between SS Lib and Non-SS lib.
...
written 4.2 years ago by
Lhl • 730
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