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Posts by lucas.a.swanson
Comment: C: Pindel Segmentation Fault
... Thanks. I cloned the source code: $ git clone https://github.com/genome/pindel.git Cloning into 'pindel'... remote: Counting objects: 3410, done. remote: Compressing objects: 100% (885/885), done. remote: Total 3410 (delta 2591), reused 3328 (delta 2509) Receiving objec ...
... I am trying to run Pindel on a RNA-seq reads-to-genome BAM file, created with the STAR aligner, and I am getting a segfault. I checked the Pindel code out with svn: svn checkout https://trac.nbic.nl/svn/pindel/trunk pindel-0.2.4w A pindel-0.2.4w/test A pindel-0.2.4w/test/SmallTe ...
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