Moderator: Andrew Su

gravatar for Andrew Su
Andrew Su4.8k
Reputation:
4,760
Status:
Trusted
Location:
San Diego, CA
Website:
http://sulab.org/
Last seen:
1 week, 4 days ago
Joined:
7 years, 8 months ago
Email:
a********@gmail.com

I am a Professor at the Scripps Research Institute. My lab is equally focused on biomedical discovery and bioinformatics tool development.

I feel like I am always looking for good postdocs and programmers, so if you're interested in open data, crowdsourcing, and/or informatically-driven biomedical discovery, please get in touch!

Posts by Andrew Su

<prev • 217 results • page 1 of 22 • next >
4
votes
1
answer
190
views
1
answer
retrieving transmembrane annotations from uniprot SPARQL
... From the [UniProt page for Traf3ip3][1], I can see that this protein is single-pass type IV membrane protein with a note that this annotation was "manual assertion inferred by curator". (The API actually also reports the specific evidence code ECO:0000305.) Can I get this information from the [UniP ...
uniprot sparql written 6 weeks ago by Andrew Su4.8k
0
votes
0
answers
508
views
0
answers
Comment: C: MyVariant.info fields descriptions?
... Nolwenn: apologies, embarrassingly I just saw your reply. Since you first posted we have drastically improved our documentation (http://docs.myvariant.info). And if anyone else has problems with the help email I posted above, feel free to contact me directly! (My email should be very google-able... ...
written 3 months ago by Andrew Su4.8k
3
votes
0
answers
340
views
0
answers
Forum: Vote David Lipman for People's Choice - 2017 Service to America Medals
... David Lipman and the GenBank team have been nominated for a [Samuel J. Heyman Service to America Medal][1], that highlights excellence in our federal workforce. He/they are also in the running for the [People's Choice Award][2]. Lipman arguably deserves a Nobel for BLAST, but we can't vote on tha ...
award blast forum genbank written 3 months ago by Andrew Su4.8k
1
vote
0
answers
508
views
0
answers
Comment: C: MyVariant.info fields descriptions?
... Or even better, help@myvariant.info! (Thanks Pierre...) ...
written 18 months ago by Andrew Su4.8k
12
votes
4
answers
2.4k
views
4
answers
Answer: A: DAVID pathway analysis
... I hate to be snarky, but if DAVID is down then that's good for everyone.  DAVID hasn't updated their Gene Ontology annotations in over five years: https://twitter.com/andrewsu/status/593084814472794113 Lots of gene annotations have been added (and some deleted) in those years.  Despite many pleas ...
written 2.3 years ago by Andrew Su4.8k
2
votes
0
answers
686
views
0
answers
News: The Mozilla Fellowship for Science - Deadline Aug 14, 2015
... The Mozilla Foundation is accepting Fellowship Applications in open science and open data for the life sciences.  Looks to be a fantastic opportunity, and might be of interest to people here on Biostars.  More info at https://www.mozillascience.org/fellows. ...
open data news open science written 2.3 years ago by Andrew Su4.8k
0
votes
0
answers
968
views
0
answers
Comment: C: MyGene.info clients: mygene.R and mygene.py
... Can you provide more details on what you're trying to accomplish?  I'm not sure I understand "define the pathway for specific genes".. ...
written 2.4 years ago by Andrew Su4.8k
4
votes
0
answers
907
views
0
answers
Job: Web/software developer(s) interested in open source, open science and citizen science
... My bioinformatics lab is currently recruiting for one or more developer positions.  We have a particular emphasis on open source, open science and citizen science.  For more information, please see this blog post! http://sulab.org/2015/04/open-source-open-science-citizen-science-join-us/ ...
open source job citizen science open science written 2.6 years ago by Andrew Su4.8k
2
votes
0
answers
1.6k
views
0
answers
Job: Bioinformatics Programmer / Web Developer, Su Lab, Scripps Research Institute, San Diego, CA, USA
... The Su Lab (http://sulab.org) is a bioinformatics research group that is equally interested in building computational infrastructure and in pursuing biomedical discoveries. We operate at the interface between biology, computer science, statistics, and software engineering. Our projects span ...
big-data crowdsourcing citizen-science job written 3.1 years ago by Andrew Su4.8k • updated 3.1 years ago by Istvan Albert ♦♦ 74k
2
votes
4
answers
3.8k
views
4
answers
Answer: A: What to look for in a potential postdoc?
... As someone who both advises students on postdoc opportunities and evaluates prospective postdoc applicants, I have four bits of advice for you: Find candidate labs that can support you in your career goals.  Decide what it is that you want to do after your postdoc (in as much detail as you can), ...
written 3.4 years ago by Andrew Su4.8k

Latest awards to Andrew Su

Appreciated 5 weeks ago, created a post with more than 5 votes. For A: Computational Biology Career Prospects
Great Question 7 months ago, created a question with more than 5,000 views. For How To Find All Gwas Studies That A Given Gene Has Been Implicated In?
Great Question 15 months ago, created a question with more than 5,000 views. For How To Link To Freebase Gene Pages Using A Gene/Protein Identifier?
Popular Question 15 months ago, created a question with more than 1,000 views. For Web Tool That Converts A Pubmed Query Into A Wordle Of The Abstracts
Popular Question 15 months ago, created a question with more than 1,000 views. For Mapping The Specificity Of Gpcrs To G-Proteins
Great Question 15 months ago, created a question with more than 5,000 views. For Full Text Retrieval From Pubmedcentral
Great Question 15 months ago, created a question with more than 5,000 views. For Web Tool That Converts A Pubmed Query Into A Wordle Of The Abstracts
Teacher 15 months ago, created an answer with at least 3 up-votes. For A: Validity Of Gene List Comparisons For Lists Originating From Different Platforms
Popular Question 15 months ago, created a question with more than 1,000 views. For Clustering With Point-Wise Error Estimates
Teacher 15 months ago, created an answer with at least 3 up-votes. For A: Publication Text Mining
Teacher 15 months ago, created an answer with at least 3 up-votes. For A: Help Make Biostar Better! Add Your Feedback, Opinions And Suggestions.
Popular Question 15 months ago, created a question with more than 1,000 views. For Microbiome/Metagenome Analysis Workflows
Popular Question 2.1 years ago, created a question with more than 1,000 views. For Online Resources For Mouse Research
Popular Question 2.3 years ago, created a question with more than 1,000 views. For Online Resources For Mouse Research
Appreciated 2.3 years ago, created a post with more than 5 votes. For A: Computational Biology Career Prospects
Good Answer 2.3 years ago, created an answer that was upvoted at least 5 times. For A: Computational Biology Career Prospects
Teacher 2.3 years ago, created an answer with at least 3 up-votes. For A: Help Make Biostar Better! Add Your Feedback, Opinions And Suggestions.
Popular Question 2.7 years ago, created a question with more than 1,000 views. For Online Resources For Mouse Research
Good Answer 2.8 years ago, created an answer that was upvoted at least 5 times. For A: Computational Biology Career Prospects
Popular Question 3.0 years ago, created a question with more than 1,000 views. For Online Resources For Mouse Research
Popular Question 3.0 years ago, created a question with more than 1,000 views. For How To Find All Gwas Studies That A Given Gene Has Been Implicated In?
Great Question 3.0 years ago, created a question with more than 5,000 views. For How To Link To Freebase Gene Pages Using A Gene/Protein Identifier?

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 694 users visited in the last hour