User: Schmid

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Schmid0
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Posts by Schmid

<prev • 6 results • page 1 of 1 • next >
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Comment: C: Output Of Running Hhblits With Multithread
... thank you naga! Prblem solved. ...
written 6.2 years ago by Schmid0
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Output Of Running Hhblits With Multithread
... Hi, I'm running HHblits using many different input files using multithread. multithread.pl '/home/chris/Bioinformatics/Virus/Mimi/*.a3m' 'hhblits -i $file -d /home/chris/Bioinformatics/hhsuite/databases/VacV/VacVdb -o $name.hhr -oa3m /home/chris/Bioinformatics/results/Mimi/$name.a3m -n 2 -norealig ...
written 6.2 years ago by Schmid0
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Answer: A: Error When Building Customized Database With Hhsearch
... I found the cause of the error. The paths to PSIPRED and BLASt executables in the hhpaths script had to be changed. ...
written 6.2 years ago by Schmid0
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Error When Building Customized Database With Hhsearch
... Hi, I am trying to build my own database with HHsearch. I have an MSA for each of the proteins I want to include in the database. When I try to add the secondary structure to each of the MSA by perl /home/chris/Bioinformatics/hhsuite-2.0.16/scripts/multithread.pl '/home/chris/Bioinformatics/hhsui ...
database written 6.2 years ago by Schmid0
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Comment: C: Help With Hhsuite Installation Needed
... thank you a lot!!! this totally solved the problem! ...
written 6.2 years ago by Schmid0
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Help With Hhsuite Installation Needed
... Hi guys, I was trying to install the HHsuite package but ran into a problem. The software should be installed on a machine running on Ubuntu 12.04 After downloading the software's latest version - from ftp://toolkit.genzentrum.lmu.de/pub/HH-suite/ - and unpacking the software one should compile the ...
written 6.2 years ago by Schmid0

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