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User: Yogesh Pandit

gravatar for Yogesh Pandit
Yogesh Pandit • 500
Reputation:
500
Status:
New User
Location:
United States
Last seen:
7 years, 6 months ago
Joined:
10 years, 3 months ago
Email:
y********@gmail.com

Posts by Yogesh Pandit

<prev • 39 results • page 1 of 4 • next >
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Answer: A: Any Recommendations For Software For Drawing Plasmid Maps?
... PlasMapper does a pretty good job too http://wishart.biology.ualberta.ca/PlasMapper/ ...
written 7.6 years ago by Yogesh Pandit • 500
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Answer: A: Linear Or 2D Representation Of Protein Sequence Secondary Structure
... You can try Bio3D. You can explore it to see if it is useful. I am not thorough with this package. But it is well documented and only a few lines of code required. ...
written 9.2 years ago by Yogesh Pandit • 500
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Answer: A: Where Can I Find Data Sets Of Cancer Publicly Available?
... You can find some more Cancer related data at synapse.sagebase.org ...
written 9.2 years ago by Yogesh Pandit • 500
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Comment: C: How To Process With Geo Raw Data Downloaded From Ncbi
... GEO2R should help you with that, provided you have more than 1 samples ...
written 9.2 years ago by Yogesh Pandit • 500
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Answer: A: How To Process With Geo Raw Data Downloaded From Ncbi
... GEO DataSet Cluster Analysis Also as a starter, you can play with the R script generated by GEO2R to handle the dataset. ...
written 9.2 years ago by Yogesh Pandit • 500
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Answer: A: Which Bioperl Module Can I Use For Parsing/Mining Blast Output?
... Link to the SearchIO module from Michael's answer http://www.bioperl.org/wiki/HOWTO:SearchIO Similar question was asked in the SEQanswers forum: http://seqanswers.com/forums/showthread.php?t=6484 ...
written 9.2 years ago by Yogesh Pandit • 500 • updated 17 months ago by Ram ♦ 32k
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Answer: A: Pubchem Database Into Mysql
... You an download all the SDF files for the latest PubChem Substance release using any FTP client from ftp://ftp.ncbi.nlm.nih.gov/pubchem/Substance/CURRENT-Full/SDF/ Then you can using ChemAxon's JChem manager to simply import all the SDFs into a MySQL database. http://www.chemaxon.com/jchem/doc/adm ...
written 9.3 years ago by Yogesh Pandit • 500 • updated 17 months ago by Ram ♦ 32k
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Geo Data Matrix Using R
... I want something like, ID GB_ACC Gene Title Gene Symbol ENTREZ_GENE_ID GO_BP GO_MF GO_CC Sample1 Sample2...... along with the corresponding values/IDs in the rows for a specific GSE. Following code gives me on the values for samples. How can I add rest of the information to the ...
geo R written 9.3 years ago by Yogesh Pandit • 500 • updated 9.3 years ago by Larry_Parnell ♦ 16k
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Answer: A: Should Biostar Be Switched Over To The Stackexchange Network?
... Yes, to migration to StackExchange. The Ads are not very troublesome. ...
written 9.3 years ago by Yogesh Pandit • 500
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Answer: A: Are There Any Molecular Biology Movies - Like That Of Attenborough'S "Life Serie
... There is this movie made at RPI; Molecules to the MAX which is based on the project Molecularium ...
written 9.4 years ago by Yogesh Pandit • 500

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