User: drodavis0

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drodavis00
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Posts by drodavis0

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Comment: C: GSEA with GGProfiler2 (?"annotated" vs "known" for background control)
... Thanks very much - makes sense! ...
written 9 days ago by drodavis00
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GSEA with GGProfiler2 (?"annotated" vs "known" for background control)
... Dear BioStars Community, Wondered if anyone could offer some advice on GGProfiler2 and a question about background control for when I use it to do a gene set enrichment analysis (background referring to a gene list for comparison, I believe). Two of the options when using this package include to us ...
ggprofiler2 rna-seq gsea written 11 days ago by drodavis00 • updated 11 days ago by ATpoint46k
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?Trimming advice with separate ChIP-seq experiments
... Dear BioStars users, I had a question I wondered if people wouldn't mind advising on. We have some ChIP-seq datasets from our lab we would like to combine with another, published ChIP-seq dataset from a different lab. When processing the data we trimmed our data to 70 nucleotides before continuing ...
trimming chip-seq written 23 days ago by drodavis00
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Comment: A: ?Design of DE analysis when one sample has no repeat
... Thanks very much for your advice! ...
written 4 weeks ago by drodavis00
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?Design of DE analysis when one sample has no repeat
... Hi! Briefly looking for some advice on what I can do with the following problem (I've tried searching this and other forums for advice, but can't seem to find any direct answers). I'm performing the bioinformatic analysis for another group's chip-seq data, which contains 2 replicates for a control ...
chip-seq written 4 weeks ago by drodavis00

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