User: lixuenan200806

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Posts by lixuenan200806

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Answer: A: Is the ssGSEA enrichment score affected by other samples in the analysis group?
... I had met the same question, I run ssgsea2.0 with the same data and parameter two times, but i got the different score ,when i use median score as cutoff value,I got high low groups with different samples ...
written 9 days ago by lixuenan20080630
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Answer: A: Creation of a large Panel of Normals for Mutect2 analysis
... Hi,has standard Panel of Normals (PON) file been created for GATK4 mutect2 ? I am interested in this file ...
written 23 months ago by lixuenan20080630
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Are There Any Tools To Convert Gatk Vcf Format To A Maf File ?
... I am doing a project about leucocythemia,I called SNP and InDel with GATK and got some vcf files.Now I want to use genome MuSiC , but I cannot convert the vcf file to a MAF file ,though I annotated after Snpeff. I could not convert with the code http://code.google.com/p/ngs-analysis/source/browse/m ...
maf gatk vcf music written 6.8 years ago by lixuenan20080630 • updated 6.6 years ago by Cyriac Kandoth5.5k

Latest awards to lixuenan200806

Popular Question 6.8 years ago, created a question with more than 1,000 views. For Are There Any Tools To Convert Gatk Vcf Format To A Maf File ?
Student 6.8 years ago, asked a question with at least 3 up-votes. For Are There Any Tools To Convert Gatk Vcf Format To A Maf File ?

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