User: cschu181
cschu181 • 1.5k
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Posts by cschu181
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... > estimated genomesize 25Gb
What on earth are you assembling over there? oO ...
written 11 days ago by
cschu181 • 1.5k
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... Love the standalone "High". ...
written 24 days ago by
cschu181 • 1.5k
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... I think this one should receive "post of the year". ...
written 24 days ago by
cschu181 • 1.5k
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Comment:
C: How to run the ViennaRNA package
... Let's take a step back. The ViennaRNA package is used for RNA secondary structure prediction (generally speaking) and not for primary structure/sequence analysis operations such as edit distance or hamming distance calculations. What exactly do you want to do?
To directly address your problem (rega ...
written 4 weeks ago by
cschu181 • 1.5k
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... Trimmomatic is java-based as well. :P There's a good reason to not advertise using bioinformatics tools on windows, though... It saves us all a lot of pain in the long run. ...
written 4 weeks ago by
cschu181 • 1.5k
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... You could install cygwin and then try running it from there. Or try [virtual box](https://itsfoss.com/install-linux-in-virtualbox/). Just as a side note, GNU GPL v3 is a license, not an operating system.
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... Does `python /path/to/where/you/git/cloned/spladder/python/spladder.py` work? ...
written 5 weeks ago by
cschu181 • 1.5k
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Comment:
C: RNA Molecule Specification
... You're talking single-stranded RNA, so Chargaff's Rule does not apply here. The rule only makes sense if you have pairs (in which case A=T and C=G (or Y=R))
D) is the only statement you can make about a single strand; A is dsDNA-specific, C would apply to dsRNA and B applies to both (although with ...
written 5 weeks ago by
cschu181 • 1.5k
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... I just tested you. Congratulations, you passed :P ...
written 7 weeks ago by
cschu181 • 1.5k
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... The Earlham Institute (EI) is seeking an enthusiastic and focused Senior Bioinformatician/Developer to join the [Core Bioinformatics Group][1].
[Click here to apply][2]
**The role:**
This post will focus on developing novel tools and pipelines for large scale annotation of genes and other genomi ...
written 7 weeks ago by
cschu181 • 1.5k
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