User: tom

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tom0
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Posts by tom

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Comment: C: bedtools genome file
... Yes, that's what I thought too, so i am now running bowtie2 again with --no-unal option. ...
written 9 days ago by tom0
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Comment: C: bedtools genome file
... Yes, I do not know where it comes from.. I will start from new. Maybe I did a mistake at some point. Thank you! ...
written 9 days ago by tom0
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Comment: A: bedtools genome file
... head your.bed 3R 11350651 11350750 3R 11350684 11350783 K00201:460:HK7VGBBXY:7:2101:1580:48931 44 3R 27784656 27784723 3R 27784657 27784724 K00201:460:HK7VGBBXY:7:2101:1580:49036 44 X 21281305 212 ...
written 9 days ago by tom0 • updated 9 days ago by GenoMax96k
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bedtools genome file
... Hello, I have some issues with bedtools genomecov. My goal is to produce bedgraph outputs from bed files using bedtools genomecov. With bed files as input, it requires a genome file. I got it from uscs table browser. It is a tab-delimitated file with 3 columns : chr / size / filename I removed the ...
bedtools sequencing written 9 days ago by tom0

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