User: a81526a

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a81526a60
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Posts by a81526a

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Assessing Quality And Accuracy Of De Novo Genome Assembly
... All, I am curious whether anyone out there has a method for assessing the quality and accuracy of de novo genome assemblies? I am currently doing in silico simulations of de novo genome assembly from a previously sequenced genome to determine the best assembly parameters (K-mer size, coverage cutoff ...
assembly quality genome similarity contigs blast written 6.4 years ago by a81526a60 • updated 4.9 years ago by h.mon29k
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The Score Meaning Of Output (.Maf) Using Mugsy And Get A Overall Aligned Score
... Well, I'm a newbie of Mugsy, so...hope I'm not asking a stupid question.... I've already have a set of contigs which is done by de novo assembler. Format of these contigs is fasta. Now I want to align these contigs to a reference sequence by using Mugsy. And obtain only single score shown the simi ...
similarity reference written 6.5 years ago by a81526a60

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