... Hi everyone,
I was wondering what's the exact relationship between the contents of these two databases:
Expasy Enzyme DB
Are the contents of any of the two somewhat included in the other one?
Thanks in advance!
I just published a blog post about how you can achieve that (also extended to a set of nodes with an arbitrary length) with Bio4j
Hope it's useful ;)
I just ran into a problem regarding isoforms specified in Uniprot XML files which are not present in the 'every' isoform fasta file available in Uniprot.
One example would be the protein: Q8IYH5
where we can find the following isoforms:
<comment type="alternative products">
<event t ...
I'm currently working on preparing a new release of Bio4j and I just ran into a problem with Uniref 100/90/50 XML files.
I found out how there are a lot of representative members that don't comply with the expected XML syntax, because either things are specified in a different way or there's m ...
... +1 for the migration to the StackExchange Network, which already is without any doubt the standard for Q&A sites such as Biostar.