User: natasha.sernova
natasha.sernova • 3.8k
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Posts by natasha.sernova
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Comment:
C: Ortholog Protein Finding Tool
... Dear Sir!
I tried to enter — I received 404-error — no requested file.
Natasha Sernova
...
written 20 days ago by
natasha.sernova • 3.8k
0
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3
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3.2k
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3
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Comment:
C: Ortholog Protein Finding Tool
... When I pressed the link, I received 404-error - no requested file.
...
written 20 days ago by
natasha.sernova • 3.8k
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... I found one probable answer by myself.
https://www.biostars.org/p/400256/
and the tool is RNAFold
But I was looking for a tool to align Stockholm-format fragments...
Then I found another tool:
https://www.biostars.org/p/335675/
...
written 5 weeks ago by
natasha.sernova • 3.8k
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... Dear all,
I have to align 230-ribonucleotide fragment many times (100)
to a single reference. Unfortunately there are 80 symbols in any single line.
What tool may I use to do it? Is it possible to make it nice somehow?
There was a post about that a long time ago, but I lost its number.
Thank you ver ...
written 7 weeks ago by
natasha.sernova • 3.8k
• updated
3 days ago by
Biostar ♦♦ 20
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... Unfortunately some genomes are elsewhere, I had to search other dbs to find most of them. ...
written 8 months ago by
natasha.sernova • 3.8k
2
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1
answer
266
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1
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... Dear all,
Nowadays many scientists have to solve some problems related to SARS-CoV-2.
The viral genomes are huge(~30kb). Is it correct, that to align several of them I have to put
those fasta-genomes to a single file, add a reference genome to the same file and
run a proper tool like MAFFT?
(lik ...
written 8 months ago by
natasha.sernova • 3.8k
0
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1.2k
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... According to this page: https://blanco.biomol.uci.edu/mpex/
it may be used.
...
written 9 months ago by
natasha.sernova • 3.8k
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356
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Comment:
C: designing PCR for COVID19
... IMHO it is an important topic. Any country has at least a few patients now.
And very few articles discuss experimental procedures and provide some details.
Where else is it possible to find some current scientific information, if not here?
Thank you! ...
written 10 months ago by
natasha.sernova • 3.8k
0
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610
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Comment:
C: Maf to Fasta
... The following post may be helpful:
https://www.biostars.org/p/386058/
Look at the right panel after you have submitted your question.
You will see a lot of similar questions! ...
written 12 months ago by
natasha.sernova • 3.8k
0
votes
1
answer
252
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1
answers
Comment:
A: GENCODE and untranslated regions
... This post looks helpful.
https://www.biostars.org/p/48502/ ...
written 13 months ago by
natasha.sernova • 3.8k
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