User: natasha.sernova
natasha.sernova • 3.7k
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Posts by natasha.sernova
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... Unfortunately some genomes are elsewhere, I had to search other dbs to find most of them. ...
written 5 months ago by
natasha.sernova • 3.7k
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... Dear all,
Nowadays many scientists have to solve some problems related to SARS-CoV-2.
The viral genomes are huge(~30kb). Is it correct, that to align several of them I have to put
those fasta-genomes to a single file, add a reference genome to the same file and
run a proper tool like MAFFT?
(lik ...
written 5 months ago by
natasha.sernova • 3.7k
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... According to this page: https://blanco.biomol.uci.edu/mpex/
it may be used.
...
written 6 months ago by
natasha.sernova • 3.7k
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Comment:
C: designing PCR for COVID19
... IMHO it is an important topic. Any country has at least a few patients now.
And very few articles discuss experimental procedures and provide some details.
Where else is it possible to find some current scientific information, if not here?
Thank you! ...
written 8 months ago by
natasha.sernova • 3.7k
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Comment:
C: Maf to Fasta
... The following post may be helpful:
https://www.biostars.org/p/386058/
Look at the right panel after you have submitted your question.
You will see a lot of similar questions! ...
written 9 months ago by
natasha.sernova • 3.7k
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Comment:
A: GENCODE and untranslated regions
... This post looks helpful.
https://www.biostars.org/p/48502/ ...
written 10 months ago by
natasha.sernova • 3.7k
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2
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Comment:
C: Which gene name should I choose?
... See these posts, they may help you. The second post shows
that it's not an easy question at all. Good luck!
https://www.biostars.org/p/164321/
https://www.biostars.org/p/1378/
https://www.biostars.org/p/319781/
Sometimes gene name depends upon species, approach or database.
https://www.biostar ...
written 11 months ago by
natasha.sernova • 3.7k
2
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Comment:
C: Update list of asseccion numbers
... There are a few posts about update of accession numbers in Biostar database,
I found some, but you may continue the search if it's not enough to you.
Go to the upper left corner of the page, press 'LATEST' and type your question:
'update of accession number'. In case there is no answer, replac ...
written 11 months ago by
natasha.sernova • 3.7k
7
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... Dear all!
Sorry, it's a trivial question.
If I like some particular post, what should I do to follow it? So far I've saved its link in a file, but is there a better way? I found just a post about following a particular post-author with many nice posts.
I would like to follow a single post. How s ...
written 11 months ago by
natasha.sernova • 3.7k
• updated
9 months ago by
andrewjacob428 • 0
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1.1k
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... > dna = "ATGCGATCGATCGATCGATCGCGCGCGCAGCTA" for i in range(0, len(dna),
> 3):
> codon = dna[i:i+3]
> # if codon == 'ATG':
> # print(str(i))
> print(codon, i)
> # why do you need str(i)?
> print(codon, str(i)) # - nothing i ...
written 11 months ago by
natasha.sernova • 3.7k
• updated
11 months ago by
Joe ♦ 18k
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