Moderator: 5heikki
5heikki ♦ 6.6k
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Posts by 5heikki
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3
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120
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... Assuming those are actually fasta formated files:
blastp -query File_2.faa -subject File_1.faa -outfmt '6 qlen length nident sstart send' \
| awk 'BEGIN{OFS=FS="\t"}{if($1==$2 && $1==$3){print $4,$5}}' ...
written 23 hours ago by
5heikki ♦ 6.6k
0
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6
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... In the end, MacBooks are also bunch of parts from different companies talking to each other. In my previous job, I had a maxed out 15" MBP and at home I have a maxed out MBA. However, I'm not going to buy another MacBook ever again, the main reason being that I don't like where macOS is going. It wo ...
written 2 days ago by
5heikki ♦ 6.6k
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6
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199
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... Copying files between Windows and Linux is very easy with Windows 10 since you have Windows Subsystem for Linux, i.e. you can use rsync/scp/whatever. I'm rather enjoying the default Ubuntu it comes with (16.04). In fact, 99% of my time on this laptop I'm just running "Ubuntu Bash" full screen with t ...
written 2 days ago by
5heikki ♦ 6.6k
0
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6
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199
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... It really depends what you're going to use it for. At work I get by with Dell Latitude 7280, but I really only use it for making a remote connection to one of my towers (one has 32 cores, 128GB RAM, 512GB SSD and 2TB Raid array, another 48 cores, 256GB RAM, 1TB NVMe SSD, 8TB Raid array) or compute c ...
written 2 days ago by
5heikki ♦ 6.6k
0
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2
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688
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2
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... http://www.dictionary.com/browse/fishing-expedition ...
written 16 days ago by
5heikki ♦ 6.6k
0
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370
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... Any particular reason for using 1.4 instead of the latest release (1.6)?
edit. just realized OP posted quite a long time ago ...
written 16 days ago by
5heikki ♦ 6.6k
0
votes
7
answers
961
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7
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... In your opinion, does [this paper][1] represent a crime against humanity?
[1]: http://www.nature.com/nature/journal/v486/n7403/full/nature10831.html ...
written 19 days ago by
5heikki ♦ 6.6k
1
vote
7
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961
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7
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... I deleted it. It's offtopic. This is not a politics forum. Should us humans and scientists write something about an apartheid regime following every question posted by someone from Israel? I would delete those posts too. Something to consider. I'm not going to engage in any further debate concerning ...
written 19 days ago by
5heikki ♦ 6.6k
0
votes
7
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961
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7
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... [Mash][1] was developed at least in part in the context of biodefence.
[1]: https://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-0997-x ...
written 19 days ago by
5heikki ♦ 6.6k
0
votes
1
answer
145
views
1
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... I would use MUMmer over Mauve.. ...
written 4 weeks ago by
5heikki ♦ 6.6k
Latest awards to 5heikki
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19 hours ago,
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For A: If you have a chance to ask questions to the CEO of Illumina, what would you do?
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4 weeks ago,
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For A: If you have a chance to ask questions to the CEO of Illumina, what would you do?
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For Bootsrapped tree from a distance matrix
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created an answer that was upvoted at least 5 times.
For A: fasta header with leading zeros
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For A: If you have a chance to ask questions to the CEO of Illumina, what would you do?
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3 months ago,
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For A: If you have a chance to ask questions to the CEO of Illumina, what would you do?
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For A: If you have a chance to ask questions to the CEO of Illumina, what would you do?
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3 months ago,
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For A: If you have a chance to ask questions to the CEO of Illumina, what would you do?
Teacher
5 months ago,
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For A: If you have a chance to ask questions to the CEO of Illumina, what would you do?
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For A: If you have a chance to ask questions to the CEO of Illumina, what would you do?
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5 months ago,
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For A: If you have a chance to ask questions to the CEO of Illumina, what would you do?
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For C: Finding a sequence in a fasta file
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5 months ago,
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For C: Finding a sequence in a fasta file
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6 months ago,
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For A: If you have a chance to ask questions to the CEO of Illumina, what would you do?
Teacher
6 months ago,
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For A: If you have a chance to ask questions to the CEO of Illumina, what would you do?
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For Are old versions of NCBI's nr stored somewhere?
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7 months ago,
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For C: Finding a sequence in a fasta file
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