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questions
0
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191
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Plotting admixture output with circular barplot using membercoeff.circos
bitev2
membercoeff
admixture
3 months ago by
PKW
▴ 110
2
votes
3
replies
1.5k
views
Beagle imputation error
imputation
Beagle
4 months ago by
PKW
▴ 110
0
votes
0
replies
231
views
Navigating Haplotype-Based Association Studies: Software Recommendations and Conversion Challenges
gcta
shapeit
gwas
haplotype
phasing
6 months ago by
PKW
▴ 110
0
votes
2
replies
328
views
Merino sheep genetic map
recombination
genetic-map
6 months ago by
PKW
▴ 110
1
vote
2
replies
1.3k
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Speeding up Eagle phasing and imputation
Eagle
bcf
bcftools
vcf
3.2 years ago by
PKW
▴ 110
0
votes
0
replies
706
views
Phasing and imputation with Shapeit
imputation
Shapeit
phasing
3.4 years ago by
PKW
▴ 110
0
votes
0
replies
508
views
Estimating the effective population size
ne
SNeP
VCF
3.5 years ago by
PKW
▴ 110
1
vote
0
replies
526
views
Duplicate genotypes after phasing in Beagle
Beagle
Phasing
3.6 years ago by
PKW
▴ 110
0
votes
0
replies
999
views
Creating a VCF file with A and B allele
VCF
plink
allele
3.7 years ago by
PKW
▴ 110
6
votes
3
replies
1.9k
views
SNP names Biomart error: Invalid filters(s): snp_filter
R
biomaRt
rsid
snpname
3.7 years ago by
PKW
▴ 110
1
vote
7
replies
3.1k
views
ARS-UCD, UMD and Btau reference SNP map files
Cattle
rs
position
chromosome
3.0 years ago by
PKW
▴ 110
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