rsID and rearranging in vcftools
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9.9 years ago
goodcow ▴ 20

When I used vcf tools on my .vcf.gz file, I got a file containing:

chromosome# | position | ... | ancestral:count | derived:count

This does not includes rsID. How can I make vcftools include the rsID? Also, is there a way to rearrange the order of the columns? I need a different order for the software I will be using it with. Thanks!

vcftools • 2.5k views
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Could anyone help with this? I still can't figure it out, and the documentation does not help.

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