Entering edit mode
9.8 years ago
hessjl
▴
90
I am new to plink and have a (hopefully) simple data management operation, but little idea of how to implement it. The essentials are listed here:
- I have three genotype call files:
data.bed
,data.fam
, anddata.bim
. - I created a file
snps.txt
containing a list of markers. - My goal is to create a file with subject IDs listed in rows and SNP IDs (as per
snps.txt
) as column headers with genotypes listed underneath.
Question: How might I go about performing this task?
Thank you for the clear explanation chrchang523! The last command you provided worked like a charm.