Question: Raxml continue interrupted bootstrap run
0
gravatar for nicholasdsanderson
5.5 years ago by
United Kingdom
nicholasdsanderson0 wrote:

After completing 98 out 100 bootstraps our server needed an emergency reboot thus interrupting my raxml job, however the completed bootstraps were written to file.

I would like to know if I can use the 98 bootstraps previously written to file to generate a best scoring ML tree so that computing time didn't go to waste. These are 178 full genome sequences that take a long time to run.

raxml bootstrapped • 1.9k views
ADD COMMENTlink modified 5.5 years ago by Siva1.7k • written 5.5 years ago by nicholasdsanderson0
0
gravatar for Siva
5.5 years ago by
Siva1.7k
United States
Siva1.7k wrote:

I believe it is possible. Perhaps, check page 57 on the recent RAxML manual. You might get a clear answer by posting in the official RAxML user support group.

ADD COMMENTlink modified 5.5 years ago • written 5.5 years ago by Siva1.7k
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