Regarding Rankprod
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10.5 years ago

Dear All,

I tried to run RankProd in R which is installed in linux.

Because I have large datasets I tried to your RPadvance, it runs fine if I don't use huge=TRUE.

When I use this

RP.out <- RPadvance(data, cl, origin, num.perm=100, logged=TRUE, na.rm=TRUE, plot=FALSE, rand=123, huge=TRUE)

I get error

Error in RPadvance(data, cl, origin, num.perm=100, logged=TRUE, :unused argument(s) (huge=TRUE)

When I run the same thing in R installed in windows it runs fine.

Any idea how to overcome this.

Thanks in advance

Regards,
Ravi

bioconductor • 2.4k views
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make sure you are running the latest version of RankProd on both Linux and windows

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Thanks for the response. Ya that was the problem indeed.

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10.5 years ago

I found out where the problem was. I have two different version of RankProd running and the older version doesn't have memory efficient version.

Thanks,

Regards

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How to add so many datasets in rankprod

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