Ouery on Standalone BLAST

Question

[dhanasekaranbioinfo]

Hello,

I have a query on Standalone BLAST. How to restrict the BLAST search against certain taxon? Let me know the syntax for performing it in the Standalone BLAST in the Linux platform.

Thank you in advance.

[Prasad]

create db of that particular taxon. if the db is already there (which should have built enabling -parse_seqids option), just pass the taxon sequence ids using different parameters like -gilist, -seqidlist or -negative_gilist based on your requirement.